RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 PPP1R3GB7ZBB8 358 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 MBD3O95983 291 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 CASP4P49662 377 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 DPCR1Q3MIW9 517 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 ALKAL1Q6UXT8 129 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 ADSSL1Q8N142 457 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 GUF1Q8N442 669 aaKnown RBP11.91□□□□□ -0.5
SCARB2-222ENST00000640634 GDPD5Q8WTR4 605 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 NAP1L5Q96NT1 182 aaPredicted RBP11.91□□□□□ -0.5
SCARB2-222ENST00000640634 ACAP3Q96P50 834 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 MED15Q96RN5 788 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 NRDE2Q9H7Z3 1164 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 TUBGCP4Q9UGJ1 667 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 TMA7Q9Y2S6 64 aaKnown RBP11.91□□□□□ -0.5
SCARB2-222ENST00000640634 GIT1Q9Y2X7 761 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 PTPRJQ12913 1337 aa11.91□□□□□ -0.5
SCARB2-222ENST00000640634 TDRD15B5MCY1 1934 aaKnown RBP11.91□□□□□ -0.5
SCARB2-222ENST00000640634 PDCD11Q14690 1871 aaKnown RBP11.9□□□□□ -0.5
SCARB2-222ENST00000640634 SMIM28A0A1B0GU29 152 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 TTC26A0AVF1 554 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 CASTOR2A6NHX0 329 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 LACTBL1A8MY62 500 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 INPPL1O15357 1258 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 HOXA2O43364 376 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 NFICP08651 508 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 CLTAP09496 248 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 GARTP22102 1010 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 ABCD1P33897 745 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 CTNNB1P35222 781 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 SLC11A1P49279 550 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 STX17P56962 302 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 RNASELQ05823 741 aaKnown RBP11.9□□□□□ -0.5
SCARB2-222ENST00000640634 GRIN2CQ14957 1233 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 SPOUT1Q5T280 376 aaKnown RBP11.9□□□□□ -0.5
SCARB2-222ENST00000640634 CCDC181Q5TID7 509 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 LMBRD2Q68DH5 695 aaPredicted RBP11.9□□□□□ -0.5
SCARB2-222ENST00000640634 SLFN12LQ6IEE8 588 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 PLEKHO2Q8TD55 490 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 PPP1R10Q96QC0 940 aaKnown RBP11.9□□□□□ -0.5
SCARB2-222ENST00000640634 ZNF576Q9H609 170 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 CTNND2Q9UQB3 1225 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 PRG3Q9Y2Y8 225 aaPredicted RBP11.9□□□□□ -0.5
SCARB2-222ENST00000640634 CITO14578 2027 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 PLXNA4Q9HCM2 1894 aa11.9□□□□□ -0.5
SCARB2-222ENST00000640634 NR3C1P04150 777 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 ITGB1P05556 798 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 YARSP54577 528 aaKnown RBP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 BCAR1P56945 870 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 NFKBIBQ15653 356 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 EPC2Q52LR7 807 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 XKR4Q5GH76 650 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 ANKRD40Q6AI12 368 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 JADE1Q6IE81 842 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 RBM43Q6ZSC3 357 aaKnown RBP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 HS2ST1Q7LGA3 356 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 EFCAB13Q8IY85 973 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 HACE1Q8IYU2 909 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 GPD1LQ8N335 351 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 COLGALT1Q8NBJ5 622 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 URGCPQ8TCY9 931 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 HASPINQ8TF76 798 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 CLP1Q92989 425 aaKnown RBP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 RPS6KC1Q96S38 1066 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 PRDM12Q9H4Q4 367 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 PDE11AQ9HCR9 933 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 ALG13Q9NP73 1137 aaKnown RBP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 RBAKQ9NYW8 714 aaPredicted RBP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 CNTN3Q9P232 1028 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 PCDHGC5Q9Y5F6 944 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 SPTBN5Q9NRC6 3674 aaKnown RBP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 PDXKO00764 312 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 PPEF2O14830 753 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 EXTL3O43909 919 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 DNAJB1P25685 340 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 ERVK-21P61565 698 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 DSC1Q08554 894 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 SNRNP35Q16560 246 aaKnown RBP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 CCDC183Q5T5S1 534 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 FAM43BQ6ZT52 329 aaPredicted RBP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 APBB1IPQ7Z5R6 666 aaPredicted RBP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 COLGALT2Q8IYK4 626 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 C3orf58Q8NDZ4 430 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 TGS1Q96RS0 853 aaKnown RBP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 VN1R3Q9BXE9 311 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 RPF1Q9H9Y2 349 aaKnown RBP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 UBN1Q9NPG3 1134 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 TOPORSQ9NS56 1045 aaPredicted RBP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 MARCH5Q9NX47 278 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.89□□□□□ -0.51
SCARB2-222ENST00000640634 TRAF3IP3Q9Y228 551 aa11.89□□□□□ -0.51
SCARB2-222ENST00000640634 ATG2AQ2TAZ0 1938 aa11.88□□□□□ -0.51
SCARB2-222ENST00000640634 EXOC3O60645 756 aa11.88□□□□□ -0.51
SCARB2-222ENST00000640634 GALTP07902 379 aa11.88□□□□□ -0.51
SCARB2-222ENST00000640634 NR2F2P24468 414 aa11.88□□□□□ -0.51
SCARB2-222ENST00000640634 BMPR1AP36894 532 aa11.88□□□□□ -0.51
SCARB2-222ENST00000640634 OR1G1P47890 313 aa11.88□□□□□ -0.51
SCARB2-222ENST00000640634 PPP2R3AQ06190 1150 aa11.88□□□□□ -0.51
SCARB2-222ENST00000640634 GRIK3Q13003 919 aa11.88□□□□□ -0.51
SCARB2-222ENST00000640634 KLHL40Q2TBA0 621 aa11.88□□□□□ -0.51
SCARB2-222ENST00000640634 CENPPQ6IPU0 288 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms