RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 PCDHGA9Q9Y5G4 932 aaKnown RBP4.25□□□□□ -1.73
ATM-230ENST00000640388 PCDHGA8Q9Y5G5 932 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 PCDHGA7Q9Y5G6 932 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 PCDHGA6Q9Y5G7 932 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 PCDHGA3Q9Y5H0 932 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 EFCAB5A4FU69 1503 aa4.25□□□□□ -1.73
ATM-230ENST00000640388 TNKSO95271 1327 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 SHANK3Q9BYB0 1731 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 TBKBP1A7MCY6 615 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 B5MCH6 92 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 NPIPB8E9PQR5 432 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 CYR61O00622 381 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 WNT10BO00744 389 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 ENDOD1O94919 500 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 HSPA6P17066 643 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 C5AR1P21730 350 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 CCND1P24385 295 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 SREBF1P36956 1147 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 ACVRL1P37023 503 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 FLT3LGP49771 235 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 KRTAP1-1Q07627 177 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 MGAT2Q10469 447 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 TOB2Q14106 344 aaPredicted RBP4.24□□□□□ -1.73
ATM-230ENST00000640388 SEPT2Q15019 361 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 VPS72Q15906 364 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 BRDTQ58F21 947 aaPredicted RBP4.24□□□□□ -1.73
ATM-230ENST00000640388 RABL3Q5HYI8 236 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 FAM47AQ5JRC9 791 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 METTL24Q5JXM2 366 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 NAIF1Q69YI7 327 aaPredicted RBP4.24□□□□□ -1.73
ATM-230ENST00000640388 ZNF572Q7Z3I7 529 aaPredicted RBP4.24□□□□□ -1.73
ATM-230ENST00000640388 DEFB132Q7Z7B7 95 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 RNF169Q8NCN4 708 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 OR2I1PQ8NGU4 316 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.24□□□□□ -1.73
ATM-230ENST00000640388 SLC35B2Q8TB61 432 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 CCHCR1Q8TD31 782 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 NRG4Q8WWG1 115 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 ASPSCR1Q9BZE9 553 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 BRINP2Q9C0B6 783 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 SENP6Q9GZR1 1112 aaPredicted RBP4.24□□□□□ -1.73
ATM-230ENST00000640388 POGKQ9P215 609 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 EIF2B4Q9UI10 523 aaKnown RBP4.24□□□□□ -1.73
ATM-230ENST00000640388 TUBD1Q9UJT1 453 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 SORCS3Q9UPU3 1222 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 CLCA2Q9UQC9 943 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 JCADQ9P266 1359 aa4.24□□□□□ -1.73
ATM-230ENST00000640388 COL16A1Q07092 1604 aaPredicted RBP4.24□□□□□ -1.73
ATM-230ENST00000640388 CEP170BQ9Y4F5 1589 aaPredicted RBP4.23□□□□□ -1.73
ATM-230ENST00000640388 hCG_2014768A0A024R1R8 64 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 FAM171A2A8MVW0 826 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 FZD9O00144 591 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 RECQL4O94761 1208 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 SCAF4O95104 1147 aaKnown RBP4.23□□□□□ -1.73
ATM-230ENST00000640388 FSHBP01225 129 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 IL2RBP14784 551 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 ALOX15P16050 662 aaPredicted RBP4.23□□□□□ -1.73
ATM-230ENST00000640388 SLC6A9P48067 706 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 PTTG1IPP53801 180 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 ANAPC15P60006 121 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 TUBA3CQ13748 450 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 CSRP2Q16527 193 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 BMT2Q1RMZ1 405 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 MEX3CQ5U5Q3 659 aaKnown RBP4.23□□□□□ -1.73
ATM-230ENST00000640388 AFMIDQ63HM1 303 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 EFCAB12Q6NXP0 572 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 TUBA3EQ6PEY2 450 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 GPRIN1Q7Z2K8 1008 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 RHOT1Q8IXI2 618 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 RPUSD2Q8IZ73 545 aaKnown RBP4.23□□□□□ -1.73
ATM-230ENST00000640388 Q8N1X5 172 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 CPT1CQ8TCG5 803 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 TFAP2CQ92754 450 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 TEKT5Q96M29 485 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 FAM193BQ96PV7 902 aaPredicted RBP4.23□□□□□ -1.73
ATM-230ENST00000640388 C7orf25Q9BPX7 421 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 NDC1Q9BTX1 674 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 KCNH6Q9H252 994 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 SLC2A4RGQ9NR83 387 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 LANCL2Q9NS86 450 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 SAP30BPQ9UHR5 308 aaKnown RBP4.23□□□□□ -1.73
ATM-230ENST00000640388 AJAP1Q9UKB5 411 aaPredicted RBP4.23□□□□□ -1.73
ATM-230ENST00000640388 SIK3Q9Y2K2 1263 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 REXO2Q9Y3B8 237 aaKnown RBP4.23□□□□□ -1.73
ATM-230ENST00000640388 HS3ST3A1Q9Y663 406 aa4.23□□□□□ -1.73
ATM-230ENST00000640388 SCAF11Q99590 1463 aaKnown RBP4.23□□□□□ -1.73
ATM-230ENST00000640388 TOP2AP11388 1531 aaKnown RBP4.22□□□□□ -1.73
ATM-230ENST00000640388 CXorf49A8MYA2 514 aaPredicted RBP4.22□□□□□ -1.73
ATM-230ENST00000640388 LEFTY2O00292 366 aa4.22□□□□□ -1.73
ATM-230ENST00000640388 PJA2O43164 708 aa4.22□□□□□ -1.73
ATM-230ENST00000640388 FZD7O75084 574 aa4.22□□□□□ -1.73
ATM-230ENST00000640388 RPS6KA4O75676 772 aa4.22□□□□□ -1.73
ATM-230ENST00000640388 RAP2AP10114 183 aa4.22□□□□□ -1.73
ATM-230ENST00000640388 FPR1P21462 350 aa4.22□□□□□ -1.73
ATM-230ENST00000640388 APOBEC3AP31941 199 aaPredicted RBP4.22□□□□□ -1.73
ATM-230ENST00000640388 GUCY1A2P33402 732 aa4.22□□□□□ -1.73
ATM-230ENST00000640388 GDF5P43026 501 aa4.22□□□□□ -1.73
ATM-230ENST00000640388 SLC16A1P53985 500 aa4.22□□□□□ -1.73
ATM-230ENST00000640388 RAP2BP61225 183 aa4.22□□□□□ -1.73
ATM-230ENST00000640388 SLC25A3Q00325 362 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms