RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 LMAN1LQ9HAT1 526 aa15.19■□□□□ 0.02
HLA-C-210ENST00000640219 BRMS1Q9HCU9 246 aa15.19■□□□□ 0.02
HLA-C-210ENST00000640219 BMP2KQ9NSY1 1161 aaPredicted RBP15.19■□□□□ 0.02
HLA-C-210ENST00000640219 MIOSQ9NXC5 875 aa15.19■□□□□ 0.02
HLA-C-210ENST00000640219 ADAM28Q9UKQ2 775 aa15.19■□□□□ 0.02
HLA-C-210ENST00000640219 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.19■□□□□ 0.02
HLA-C-210ENST00000640219 ZZEF1O43149 2961 aa15.19■□□□□ 0.02
HLA-C-210ENST00000640219 RALGAPA1Q6GYQ0 2036 aa15.19■□□□□ 0.02
HLA-C-210ENST00000640219 ZFYVE26Q68DK2 2539 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 ASPMQ8IZT6 3477 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 CHURC1-FNTBB4DL54 471 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 MAFO75444 373 aaPredicted RBP15.18■□□□□ 0.02
HLA-C-210ENST00000640219 CNR2P34972 360 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 FNTBP49356 437 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 SATB1Q01826 763 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 PABPC1LQ4VXU2 614 aaKnown RBP15.18■□□□□ 0.02
HLA-C-210ENST00000640219 NCAPH2Q6IBW4 605 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 MOXD1Q6UVY6 613 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 C12orf50Q8NA57 414 aaPredicted RBP15.18■□□□□ 0.02
HLA-C-210ENST00000640219 MCRS1Q96EZ8 462 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 TMEM60Q9H2L4 133 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 RNF39Q9H2S5 420 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 HCFC1R1Q9NWW0 138 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 KCNH3Q9ULD8 1083 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 IPPQ9Y573 584 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 SPEGQ15772 3267 aa15.18■□□□□ 0.02
HLA-C-210ENST00000640219 A0A087WWV3 80 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 SOBPA7XYQ1 873 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 TADA2AO75478 443 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 STBD1O95210 358 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 PDIA4P13667 645 aaKnown RBP15.17■□□□□ 0.02
HLA-C-210ENST00000640219 NASPP49321 788 aaPredicted RBP15.17■□□□□ 0.02
HLA-C-210ENST00000640219 SF3A2Q15428 464 aaKnown RBP15.17■□□□□ 0.02
HLA-C-210ENST00000640219 RTP2Q5QGT7 225 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 PPP4R3AQ6IN85 833 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 SRGAP1Q7Z6B7 1085 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 FAM177A1Q8N128 213 aaPredicted RBP15.17■□□□□ 0.02
HLA-C-210ENST00000640219 FAM160A2Q8N612 972 aaPredicted RBP15.17■□□□□ 0.02
HLA-C-210ENST00000640219 ZNF579Q8NAF0 562 aaKnown RBP15.17■□□□□ 0.02
HLA-C-210ENST00000640219 KDF1Q8NAX2 398 aaPredicted RBP15.17■□□□□ 0.02
HLA-C-210ENST00000640219 FAM184AQ8NB25 1140 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 FAM3CQ92520 227 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 RABGGTAQ92696 567 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 ZFP42Q96MM3 310 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 CLSTN3Q9BQT9 956 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 JPH2Q9BR39 696 aaPredicted RBP15.17■□□□□ 0.02
HLA-C-210ENST00000640219 LLPHQ9BRT6 129 aaKnown RBP15.17■□□□□ 0.02
HLA-C-210ENST00000640219 MINDY3Q9H8M7 445 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 RGL1Q9NZL6 768 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 DNMT3BQ9UBC3 853 aaKnown RBP15.17■□□□□ 0.02
HLA-C-210ENST00000640219 MRPS23Q9Y3D9 190 aaKnown RBP15.17■□□□□ 0.02
HLA-C-210ENST00000640219 COL4A3BPQ9Y5P4 624 aa15.17■□□□□ 0.02
HLA-C-210ENST00000640219 ZBTB39O15060 712 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 KCNK5O95279 499 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 POU2F2P09086 479 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 SRGAP2CP0DJJ0 459 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 MCM7P33993 719 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 CYP4A11Q02928 519 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 SPIRE1Q08AE8 756 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 ZNF174Q15697 407 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 AXDND1Q5T1B0 1012 aaPredicted RBP15.16■□□□□ 0.02
HLA-C-210ENST00000640219 STPG1Q5TH74 334 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 TANGO2Q6ICL3 276 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 CAVIN1Q6NZI2 390 aaKnown RBP15.16■□□□□ 0.02
HLA-C-210ENST00000640219 CEP68Q76N32 757 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 LONP2Q86WA8 852 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 SLC7A14Q8TBB6 771 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 ELSPBP1Q96BH3 223 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 EIF2AQ9BY44 585 aaKnown RBP15.16■□□□□ 0.02
HLA-C-210ENST00000640219 PANK2Q9BZ23 570 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 BRD9Q9H8M2 597 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 GDE1Q9NZC3 331 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 HES2Q9Y543 173 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 ATP6V1DQ9Y5K8 247 aa15.16■□□□□ 0.02
HLA-C-210ENST00000640219 SF3B1O75533 1304 aaKnown RBP eCLIP15.16■□□□□ 0.02
HLA-C-210ENST00000640219 MARCH6O60337 910 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 GJB2P29033 226 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 NPEPPSP55786 919 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 PPP2R5CQ13362 524 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 CTTNQ14247 550 aaKnown RBP15.15■□□□□ 0.02
HLA-C-210ENST00000640219 PSMD5Q16401 504 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 CALCRLQ16602 461 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 ZSCAN23Q3MJ62 389 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 HEATR6Q6AI08 1181 aaKnown RBP15.15■□□□□ 0.02
HLA-C-210ENST00000640219 CEP57Q86XR8 500 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 FBXO18Q8NFZ0 1043 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 RDM1Q8NG50 284 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 DYDC2Q96IM9 177 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 APOL6Q9BWW8 343 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 RXFP3Q9NSD7 469 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 ZDHHC9Q9Y397 364 aa15.15■□□□□ 0.02
HLA-C-210ENST00000640219 AXIN1O15169 862 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 NEMFO60524 1076 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 ERLIN2O94905 339 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 ZNF806P0C7X5 589 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 GCFC2P16383 781 aaKnown RBP15.14■□□□□ 0.01
HLA-C-210ENST00000640219 TXKP42681 527 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 HMGN5P82970 282 aaKnown RBP15.14■□□□□ 0.01
HLA-C-210ENST00000640219 GAS6Q14393 721 aa15.14■□□□□ 0.01
HLA-C-210ENST00000640219 GRM2Q14416 872 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms