RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 AMY1AP04745 511 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 HLA-DOAP06340 250 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 ELANEP08246 267 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 BMP5P22003 454 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 BMPR1AP36894 532 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 PURAQ00577 322 aaKnown RBP6.53□□□□□ -1.36
CCDC7-216ENST00000640058 FAM50AQ14320 339 aaKnown RBP6.53□□□□□ -1.36
CCDC7-216ENST00000640058 UBXN2BQ14CS0 331 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 MAPKAPK5Q8IW41 473 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 RHOT1Q8IXI2 618 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 ASB10Q8WXI3 467 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 REXO4Q9GZR2 422 aaKnown RBP6.53□□□□□ -1.36
CCDC7-216ENST00000640058 PUS7LQ9H0K6 701 aaKnown RBP6.53□□□□□ -1.36
CCDC7-216ENST00000640058 MKS1Q9NXB0 559 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 DKK2Q9UBU2 259 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 PACSIN3Q9UKS6 424 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 AATKQ6ZMQ8 1374 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 SBNO2Q9Y2G9 1366 aa6.53□□□□□ -1.36
CCDC7-216ENST00000640058 CCDC78A2IDD5 438 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 MYBL2P10244 700 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 CDKN1CP49918 316 aaPredicted RBP6.52□□□□□ -1.37
CCDC7-216ENST00000640058 USP14P54578 494 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 NANOS3P60323 173 aaKnown RBP6.52□□□□□ -1.37
CCDC7-216ENST00000640058 MTM1Q13496 603 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 OTUD7BQ6GQQ9 843 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 NECAB2Q7Z6G3 386 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 DNAJC10Q8IXB1 793 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 CBARPQ8N350 705 aaPredicted RBP6.52□□□□□ -1.37
CCDC7-216ENST00000640058 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.52□□□□□ -1.37
CCDC7-216ENST00000640058 SUPT20HQ8NEM7 779 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 C1orf162Q8NEQ5 155 aaPredicted RBP6.52□□□□□ -1.37
CCDC7-216ENST00000640058 CASKIN2Q8WXE0 1202 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 MTMR8Q96EF0 704 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 RNF31Q96EP0 1072 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 C7orf25Q9BPX7 421 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 CCDC8Q9H0W5 538 aaPredicted RBP6.52□□□□□ -1.37
CCDC7-216ENST00000640058 TMX1Q9H3N1 280 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 MANSC1Q9H8J5 431 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 USP25Q9UHP3 1055 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 TUBD1Q9UJT1 453 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 TRHDEQ9UKU6 1024 aa6.52□□□□□ -1.37
CCDC7-216ENST00000640058 MYBBP1AQ9BQG0 1328 aaKnown RBP6.51□□□□□ -1.37
CCDC7-216ENST00000640058 TCRBV7S2A1N4TA0A589 114 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 TRIM75PA6NK02 468 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 MARCH11A6NNE9 402 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 KIAA0391O15091 583 aaKnown RBP6.51□□□□□ -1.37
CCDC7-216ENST00000640058 XPOTO43592 962 aaKnown RBP6.51□□□□□ -1.37
CCDC7-216ENST00000640058 CDKL5O76039 1030 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 CFIP05156 583 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 ITGAMP11215 1152 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 MXRA7P84157 204 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 OCA2Q04671 838 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 SEM1Q6ZVN7 128 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 JADE3Q92613 823 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 CAVIN3Q969G5 261 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 ALOXE3Q9BYJ1 711 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 RNF181Q9P0P0 153 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 COL4A3Q01955 1670 aa6.51□□□□□ -1.37
CCDC7-216ENST00000640058 A0A1B0GTW7 788 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 TEX33O43247 280 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 NDUFS2O75306 463 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 KATNA1O75449 491 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 RHOBTB3O94955 611 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 DDCP20711 480 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 C5AR1P21730 350 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 FGFR4P22455 802 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 GUCY2FP51841 1108 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 EVA1CP58658 441 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 HSD11B2P80365 405 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 ITKQ08881 620 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 INAVAQ3KP66 663 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 B3GNTL1Q67FW5 361 aaPredicted RBP6.5□□□□□ -1.37
CCDC7-216ENST00000640058 TMEM132CQ8N3T6 1108 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 TESQ9UGI8 421 aaKnown RBP6.5□□□□□ -1.37
CCDC7-216ENST00000640058 PCDHA13Q9Y5I0 950 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 NOX1Q9Y5S8 564 aa6.5□□□□□ -1.37
CCDC7-216ENST00000640058 CDHR4A6H8M9 788 aa6.49□□□□□ -1.37
CCDC7-216ENST00000640058 NUDT3O95989 172 aa6.49□□□□□ -1.37
CCDC7-216ENST00000640058 CDK11BP21127 795 aaKnown RBP6.49□□□□□ -1.37
CCDC7-216ENST00000640058 PLA2G5P39877 138 aa6.49□□□□□ -1.37
CCDC7-216ENST00000640058 MTMR1Q13613 665 aa6.49□□□□□ -1.37
CCDC7-216ENST00000640058 SPDYE7PQ495Y7 208 aa6.49□□□□□ -1.37
CCDC7-216ENST00000640058 SYDE2Q5VT97 1194 aa6.49□□□□□ -1.37
CCDC7-216ENST00000640058 CYFIP2Q96F07 1278 aa6.49□□□□□ -1.37
CCDC7-216ENST00000640058 FAXDC2Q96IV6 333 aa6.49□□□□□ -1.37
CCDC7-216ENST00000640058 TMX3Q96JJ7 454 aa6.49□□□□□ -1.37
CCDC7-216ENST00000640058 RNPEPQ9H4A4 650 aa6.49□□□□□ -1.37
CCDC7-216ENST00000640058 GSTO2Q9H4Y5 243 aa6.49□□□□□ -1.37
CCDC7-216ENST00000640058 ZNHIT2Q9UHR6 403 aa6.49□□□□□ -1.37
CCDC7-216ENST00000640058 PIPSLA2A3N6 862 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 PCDHGA12O60330 932 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 GPANK1O95872 356 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 FOSP01100 380 aaPredicted RBP6.48□□□□□ -1.37
CCDC7-216ENST00000640058 LMNAP02545 664 aaKnown RBP6.48□□□□□ -1.37
CCDC7-216ENST00000640058 GCSHP23434 173 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 NOMO3P69849 1222 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 ATP8B2P98198 1209 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 CREMQ03060 361 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 TARDBPQ13148 414 aaKnown RBP eCLIP6.48□□□□□ -1.37
CCDC7-216ENST00000640058 NOMO2Q5JPE7 1267 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms