RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 KCND2Q9NZV8 630 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 KCNG1Q9UIX4 513 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 HNRNPA1P09651 372 aaKnown RBP eCLIP22■■□□□ 1.11
CLN6-222ENST00000637667 SMTNP53814 917 aa22■■□□□ 1.11
CLN6-222ENST00000637667 SOX4Q06945 474 aaPredicted RBP22■■□□□ 1.11
CLN6-222ENST00000637667 STRN3Q13033 797 aa22■■□□□ 1.11
CLN6-222ENST00000637667 DDX27Q96GQ7 796 aaKnown RBP22■■□□□ 1.11
CLN6-222ENST00000637667 ACAP3Q96P50 834 aa22■■□□□ 1.11
CLN6-222ENST00000637667 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22■■□□□ 1.112e-9■■■■■ 36.3
CLN6-222ENST00000637667 MTRRQ9UBK8 725 aa22■■□□□ 1.11
CLN6-222ENST00000637667 SLC26A4O43511 780 aa21.99■■□□□ 1.11
CLN6-222ENST00000637667 TRAPPC3O43617 180 aa21.99■■□□□ 1.11
CLN6-222ENST00000637667 C8AP07357 584 aa21.99■■□□□ 1.11
CLN6-222ENST00000637667 MAPTP10636 758 aaKnown RBP21.99■■□□□ 1.11
CLN6-222ENST00000637667 HARSP12081 509 aaKnown RBP21.99■■□□□ 1.11
CLN6-222ENST00000637667 KCNE1P15382 129 aa21.99■■□□□ 1.11
CLN6-222ENST00000637667 RAB33AQ14088 237 aa21.99■■□□□ 1.11
CLN6-222ENST00000637667 ASTLQ6HA08 431 aaPredicted RBP21.99■■□□□ 1.11
CLN6-222ENST00000637667 GET4Q7L5D6 327 aaPredicted RBP21.99■■□□□ 1.11
CLN6-222ENST00000637667 TMEM105Q8N8V8 129 aa21.99■■□□□ 1.11
CLN6-222ENST00000637667 C3orf58Q8NDZ4 430 aa21.99■■□□□ 1.11
CLN6-222ENST00000637667 RSAD2Q8WXG1 361 aa21.99■■□□□ 1.11
CLN6-222ENST00000637667 ZBTB45Q96K62 511 aaPredicted RBP21.99■■□□□ 1.11
CLN6-222ENST00000637667 AK8Q96MA6 479 aa21.99■■□□□ 1.11
CLN6-222ENST00000637667 ZMAT2Q96NC0 199 aaKnown RBP21.99■■□□□ 1.11
CLN6-222ENST00000637667 PHOX2BQ99453 314 aa21.99■■□□□ 1.11
CLN6-222ENST00000637667 DOCK8Q8NF50 2099 aa21.99■■□□□ 1.11
CLN6-222ENST00000637667 MTCL1Q9Y4B5 1905 aaKnown RBP21.98■■□□□ 1.11
CLN6-222ENST00000637667 I3L4J1 428 aa21.98■■□□□ 1.11
CLN6-222ENST00000637667 TOM1L1O75674 476 aa21.98■■□□□ 1.11
CLN6-222ENST00000637667 TKTP29401 623 aaKnown RBP21.98■■□□□ 1.11
CLN6-222ENST00000637667 HOXA9P31269 272 aa21.98■■□□□ 1.11
CLN6-222ENST00000637667 OR1D2P34982 312 aa21.98■■□□□ 1.11
CLN6-222ENST00000637667 BRCC3P46736 316 aa21.98■■□□□ 1.11
CLN6-222ENST00000637667 NOLC1Q14978 699 aaKnown RBP eCLIP21.98■■□□□ 1.11
CLN6-222ENST00000637667 PPM1LQ5SGD2 360 aa21.98■■□□□ 1.11
CLN6-222ENST00000637667 NXPE3Q969Y0 559 aa21.98■■□□□ 1.11
CLN6-222ENST00000637667 IRF2BPLQ9H1B7 796 aa21.98■■□□□ 1.11
CLN6-222ENST00000637667 CNTN3Q9P232 1028 aa21.98■■□□□ 1.11
CLN6-222ENST00000637667 ANKFY1Q9P2R3 1169 aa21.98■■□□□ 1.11
CLN6-222ENST00000637667 FBXL21Q9UKT6 434 aa21.98■■□□□ 1.11
CLN6-222ENST00000637667 BACE2Q9Y5Z0 518 aa21.98■■□□□ 1.11
CLN6-222ENST00000637667 NPHP3-ACAD11A0A0J9YXS1 232 aa21.97■■□□□ 1.11
CLN6-222ENST00000637667 PODXLO00592 558 aa21.97■■□□□ 1.11
CLN6-222ENST00000637667 GALR2O43603 387 aaPredicted RBP21.97■■□□□ 1.11
CLN6-222ENST00000637667 NARSO43776 548 aaKnown RBP21.97■■□□□ 1.11
CLN6-222ENST00000637667 BMP15O95972 392 aa21.97■■□□□ 1.11
CLN6-222ENST00000637667 LAMP2P13473 410 aa21.97■■□□□ 1.11
CLN6-222ENST00000637667 FSHRP23945 695 aa21.97■■□□□ 1.11
CLN6-222ENST00000637667 UBA7P41226 1012 aa21.97■■□□□ 1.11
CLN6-222ENST00000637667 CLCN5P51795 746 aa21.97■■□□□ 1.11
CLN6-222ENST00000637667 ARSHQ5FYA8 562 aa21.97■■□□□ 1.11
CLN6-222ENST00000637667 RSPO2Q6UXX9 243 aaPredicted RBP21.97■■□□□ 1.11
CLN6-222ENST00000637667 ZPBP2Q6X784 338 aa21.97■■□□□ 1.11
CLN6-222ENST00000637667 ANKS3Q6ZW76 656 aa21.97■■□□□ 1.11
CLN6-222ENST00000637667 GRASPQ7Z6J2 395 aaPredicted RBP21.97■■□□□ 1.11
CLN6-222ENST00000637667 ZFHX2Q9C0A1 2572 aaPredicted RBP21.96■■□□□ 1.11
CLN6-222ENST00000637667 VWA8A3KMH1 1905 aa21.96■■□□□ 1.11
CLN6-222ENST00000637667 TRIP11Q15643 1979 aa21.96■■□□□ 1.11
CLN6-222ENST00000637667 CCL16O15467 120 aa21.96■■□□□ 1.11
CLN6-222ENST00000637667 MEFVO15553 781 aaPredicted RBP21.96■■□□□ 1.11
CLN6-222ENST00000637667 XYLBO75191 536 aa21.96■■□□□ 1.11
CLN6-222ENST00000637667 CACNB1Q02641 598 aaPredicted RBP21.96■■□□□ 1.11
CLN6-222ENST00000637667 AXDND1Q5T1B0 1012 aaPredicted RBP21.96■■□□□ 1.11
CLN6-222ENST00000637667 BRAPQ7Z569 592 aa21.96■■□□□ 1.11
CLN6-222ENST00000637667 SLC44A3Q8N4M1 653 aa21.96■■□□□ 1.11
CLN6-222ENST00000637667 FLCNQ8NFG4 579 aa21.96■■□□□ 1.11
CLN6-222ENST00000637667 SLC7A14Q8TBB6 771 aa21.96■■□□□ 1.11
CLN6-222ENST00000637667 C18orf25Q96B23 403 aaPredicted RBP21.96■■□□□ 1.11
CLN6-222ENST00000637667 CALML4Q96GE6 196 aa21.96■■□□□ 1.11
CLN6-222ENST00000637667 LARSQ9P2J5 1176 aaKnown RBP21.96■■□□□ 1.11
CLN6-222ENST00000637667 CDY1Q9Y6F8 540 aa21.96■■□□□ 1.11
CLN6-222ENST00000637667 ANHXE9PGG2 379 aa21.95■■□□□ 1.1
CLN6-222ENST00000637667 H0YCG3 227 aa21.95■■□□□ 1.1
CLN6-222ENST00000637667 POU2F2P09086 479 aa21.95■■□□□ 1.1
CLN6-222ENST00000637667 RPL9P32969 192 aaKnown RBP21.95■■□□□ 1.1
CLN6-222ENST00000637667 NTHL1P78549 312 aa21.95■■□□□ 1.1
CLN6-222ENST00000637667 MCL1Q07820 350 aa21.95■■□□□ 1.1
CLN6-222ENST00000637667 UVSSAQ2YD98 709 aa21.95■■□□□ 1.1
CLN6-222ENST00000637667 SLC10A6Q3KNW5 377 aa21.95■■□□□ 1.1
CLN6-222ENST00000637667 CWF19L1Q69YN2 538 aaKnown RBP21.95■■□□□ 1.1
CLN6-222ENST00000637667 GPBP1Q86WP2 473 aa21.95■■□□□ 1.1
CLN6-222ENST00000637667 SIX5Q8N196 739 aa21.95■■□□□ 1.1
CLN6-222ENST00000637667 ODF2LQ9ULJ1 636 aa21.95■■□□□ 1.1
CLN6-222ENST00000637667 ZFP37Q9Y6Q3 630 aaPredicted RBP21.95■■□□□ 1.1
CLN6-222ENST00000637667 DOCK6Q96HP0 2047 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 CLDN3O15551 220 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 NPR3P17342 541 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 NCKAP1LP55160 1127 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 HTR4Q13639 388 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 SEZ6Q53EL9 994 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 VARS2Q5ST30 1063 aaKnown RBP21.94■■□□□ 1.1
CLN6-222ENST00000637667 RTL10Q7L3V2 364 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 LRRC15Q8TF66 581 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 ATOH1Q92858 354 aaPredicted RBP21.94■■□□□ 1.1
CLN6-222ENST00000637667 KCNN1Q92952 543 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 BICD1Q96G01 975 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 REEP2Q9BRK0 252 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 FAM86C1Q9NVL1 165 aa21.94■■□□□ 1.1
CLN6-222ENST00000637667 WNT16Q9UBV4 365 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms