RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 LRRC4Q9HBW1 653 aa16.79■□□□□ 0.28
CLN5-218ENST00000637397 PSMC3IPQ9P2W1 217 aaPredicted RBP16.79■□□□□ 0.28
CLN5-218ENST00000637397 MARCOQ9UEW3 520 aaPredicted RBP16.79■□□□□ 0.28
CLN5-218ENST00000637397 NOD1Q9Y239 953 aa16.79■□□□□ 0.28
CLN5-218ENST00000637397 RARGP13631 454 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 ZNF844Q08AG5 666 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 C1orf228Q6PIY5 440 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 PNMA5Q96PV4 448 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 MTRQ99707 1265 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 NACA2Q9H009 215 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 CYP26B1Q9NR63 512 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 CCDC22O60826 627 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 EIF3EP60228 445 aaKnown RBP16.78■□□□□ 0.28
CLN5-218ENST00000637397 RABGAP1LQ5R372 815 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 RCOR2Q8IZ40 523 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 LINC00116Q8NCU8 138 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 AIPL1Q9NZN9 384 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 SPATA31D1Q6ZQQ2 1576 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 ANP32DO95626 131 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 FNTAP49354 379 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 FAM102AQ5T9C2 384 aaPredicted RBP16.78■□□□□ 0.28
CLN5-218ENST00000637397 INTS5Q6P9B9 1019 aaKnown RBP16.78■□□□□ 0.28
CLN5-218ENST00000637397 GTF3C4Q9UKN8 822 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 SUGT1Q9Y2Z0 365 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 NQO1P15559 274 aaKnown RBP16.78■□□□□ 0.28
CLN5-218ENST00000637397 TARSP26639 723 aaKnown RBP16.78■□□□□ 0.28
CLN5-218ENST00000637397 ZNF568Q3ZCX4 644 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 LVRNQ6Q4G3 990 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 NSUN6Q8TEA1 469 aaKnown RBP16.78■□□□□ 0.28
CLN5-218ENST00000637397 SENP7Q9BQF6 1050 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 WWP1Q9H0M0 922 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 CCDC68Q9H2F9 335 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 KCND2Q9NZV8 630 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 PCDHB2Q9Y5E7 798 aa16.78■□□□□ 0.28
CLN5-218ENST00000637397 M0QYV0 167 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 C2CD6Q53TS8 623 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 SNRNP48Q6IEG0 339 aaKnown RBP16.77■□□□□ 0.28
CLN5-218ENST00000637397 OR6B3Q8NGW1 331 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 FGD4Q96M96 766 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 MYO3BQ8WXR4 1341 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 EPHB6O15197 1021 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 C21orf2O43822 256 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 UBOX5O94941 541 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 KRT3P12035 628 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 SKOR1P84550 965 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 TMED1Q13445 227 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 LRRC36Q1X8D7 754 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 SP8Q8IXZ3 490 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 MID2Q9UJV3 735 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 ALDH18A1P54886 795 aaKnown RBP16.77■□□□□ 0.28
CLN5-218ENST00000637397 AMPD2Q01433 879 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 PLA2G4FQ68DD2 849 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 C3orf62Q6ZUJ4 267 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 DNAJC9Q8WXX5 260 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 GDF3Q9NR23 364 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 BLOC1S4Q9NUP1 217 aa16.77■□□□□ 0.28
CLN5-218ENST00000637397 PJA2O43164 708 aa16.77■□□□□ 0.27
CLN5-218ENST00000637397 SGPL1O95470 568 aa16.77■□□□□ 0.27
CLN5-218ENST00000637397 GRM1Q13255 1194 aa16.77■□□□□ 0.27
CLN5-218ENST00000637397 ITIH4Q14624 930 aa16.77■□□□□ 0.27
CLN5-218ENST00000637397 FSCBQ5H9T9 825 aa16.77■□□□□ 0.27
CLN5-218ENST00000637397 PRR5LQ6MZQ0 368 aa16.77■□□□□ 0.27
CLN5-218ENST00000637397 VGLL2Q8N8G2 317 aa16.77■□□□□ 0.27
CLN5-218ENST00000637397 MCEEQ96PE7 176 aa16.77■□□□□ 0.27
CLN5-218ENST00000637397 CDC42EP4Q9H3Q1 356 aaKnown RBP16.77■□□□□ 0.27
CLN5-218ENST00000637397 M0QZ92 97 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 SDC4P31431 198 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 NPEPPSP55786 919 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 TMC3Q7Z5M5 1100 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 CEP70Q8NHQ1 597 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 POLR3CQ9BUI4 534 aaPredicted RBP16.76■□□□□ 0.27
CLN5-218ENST00000637397 RANBP17Q9H2T7 1088 aaKnown RBP16.76■□□□□ 0.27
CLN5-218ENST00000637397 INPP5FQ9Y2H2 1132 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 SIK3Q9Y2K2 1263 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 NVLO15381 856 aaKnown RBP16.76■□□□□ 0.27
CLN5-218ENST00000637397 SH3BP5O60239 455 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 SRGAP2BP0DMP2 458 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 KCNMA1Q12791 1236 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 ATP8B4Q8TF62 1192 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 WNT7AO00755 349 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 CYTH3O43739 400 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 PSMC6P62333 389 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 THOC5Q13769 683 aaKnown RBP16.76■□□□□ 0.27
CLN5-218ENST00000637397 HACE1Q8IYU2 909 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 KDM4CQ9H3R0 1056 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 CHMP2BQ9UQN3 213 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 REXO2Q9Y3B8 237 aaKnown RBP16.76■□□□□ 0.27
CLN5-218ENST00000637397 HNRNPCL1O60812 293 aaKnown RBP16.76■□□□□ 0.27
CLN5-218ENST00000637397 GPC3P51654 580 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 TMEM154Q6P9G4 183 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 BZW1Q7L1Q6 419 aaKnown RBP16.76■□□□□ 0.27
CLN5-218ENST00000637397 RBBP8NLQ8NC74 664 aaPredicted RBP16.76■□□□□ 0.27
CLN5-218ENST00000637397 AGR3Q8TD06 166 aa16.76■□□□□ 0.27
CLN5-218ENST00000637397 SULF1Q8IWU6 871 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 EXOC8Q8IYI6 725 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 KLHL8Q9P2G9 620 aaPredicted RBP16.75■□□□□ 0.27
CLN5-218ENST00000637397 NUB1Q9Y5A7 615 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 SLC4A7Q9Y6M7 1214 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 PTENP60484 403 aa16.75■□□□□ 0.27
CLN5-218ENST00000637397 SPP2Q13103 211 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms