RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SNX27Q96L92 541 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 NTPCRQ9BSD7 190 aaKnown RBP19.61■□□□□ 0.73
PNKP-225ENST00000636214 GOLGA2P5Q9HBQ8 144 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 PTPRHQ9HD43 1115 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 FBXW11Q9UKB1 542 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 FBXL21Q9UKT6 434 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 ODF2LQ9ULJ1 636 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 NUB1Q9Y5A7 615 aa19.61■□□□□ 0.73
PNKP-225ENST00000636214 CACNA1HO95180 2353 aa19.6■□□□□ 0.73
PNKP-225ENST00000636214 PODXLO00592 558 aa19.6■□□□□ 0.73
PNKP-225ENST00000636214 CLDN3O15551 220 aa19.6■□□□□ 0.73
PNKP-225ENST00000636214 TBCAO75347 108 aaKnown RBP19.6■□□□□ 0.73
PNKP-225ENST00000636214 HNRNPA1P09651 372 aaKnown RBP eCLIP19.6■□□□□ 0.73
PNKP-225ENST00000636214 AVPR2P30518 371 aa19.6■□□□□ 0.73
PNKP-225ENST00000636214 CACNB1Q02641 598 aaPredicted RBP19.6■□□□□ 0.73
PNKP-225ENST00000636214 UPP1Q16831 310 aa19.6■□□□□ 0.73
PNKP-225ENST00000636214 LILRA6Q6PI73 481 aa19.6■□□□□ 0.73
PNKP-225ENST00000636214 ANKS3Q6ZW76 656 aa19.6■□□□□ 0.73
PNKP-225ENST00000636214 GET4Q7L5D6 327 aaPredicted RBP19.6■□□□□ 0.73
PNKP-225ENST00000636214 ZNF707Q96C28 371 aaPredicted RBP19.6■□□□□ 0.73
PNKP-225ENST00000636214 CLSTN3Q9BQT9 956 aa19.6■□□□□ 0.73
PNKP-225ENST00000636214 KCNK12Q9HB15 430 aa19.6■□□□□ 0.73
PNKP-225ENST00000636214 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.6■□□□□ 0.73
PNKP-225ENST00000636214 POLIQ9UNA4 740 aa19.6■□□□□ 0.73
PNKP-225ENST00000636214 VWA8A3KMH1 1905 aa19.6■□□□□ 0.73
PNKP-225ENST00000636214 KMT2EQ8IZD2 1858 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 K7ENM7 598 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 C8AP07357 584 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 MAPTP10636 758 aaKnown RBP19.59■□□□□ 0.73
PNKP-225ENST00000636214 KCNE1P15382 129 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 SCP2P22307 547 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 FGFR3P22607 806 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 RFX1P22670 979 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 PROZP22891 400 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 VCPP55072 806 aaKnown RBP19.59■□□□□ 0.73
PNKP-225ENST00000636214 SF3A1Q15459 793 aaKnown RBP19.59■□□□□ 0.73
PNKP-225ENST00000636214 ZPBP2Q6X784 338 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 MYCT1Q8N699 235 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 IRF2BPLQ9H1B7 796 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 ZHX3Q9H4I2 956 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 MTRRQ9UBK8 725 aa19.59■□□□□ 0.73
PNKP-225ENST00000636214 DOCK8Q8NF50 2099 aa19.58■□□□□ 0.73
PNKP-225ENST00000636214 NPHP3-ACAD11A0A0J9YXS1 232 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 PDGFBP01127 241 aaPredicted RBP19.58■□□□□ 0.72
PNKP-225ENST00000636214 TKTP29401 623 aaKnown RBP19.58■□□□□ 0.72
PNKP-225ENST00000636214 OR1D2P34982 312 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 LIG4P49917 911 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 XKR4Q5GH76 650 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 IER5LQ5T953 404 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 ALKAL1Q6UXT8 129 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 ALYREFQ86V81 257 aaKnown RBP19.58■□□□□ 0.72
PNKP-225ENST00000636214 PRSS33Q8NF86 280 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 NXPE3Q969Y0 559 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 ZBTB45Q96K62 511 aaPredicted RBP19.58■□□□□ 0.72
PNKP-225ENST00000636214 SMOC2Q9H3U7 446 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 PARVGQ9HBI0 331 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 CNTN3Q9P232 1028 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 EPS15L1Q9UBC2 864 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 DUSP12Q9UNI6 340 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 CDY1Q9Y6F8 540 aa19.58■□□□□ 0.72
PNKP-225ENST00000636214 HNRNPDLO14979 420 aaKnown RBP19.57■□□□□ 0.72
PNKP-225ENST00000636214 PLCG1P19174 1290 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 FSHRP23945 695 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 HOXA9P31269 272 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 RPL9P32969 192 aaKnown RBP19.57■□□□□ 0.72
PNKP-225ENST00000636214 ABCD1P33897 745 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 MCM4P33991 863 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 TXLNAP40222 546 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 BRCC3P46736 316 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 NUBP1P53384 320 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 NCKAP1LP55160 1127 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 CUL4AQ13619 759 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 RAB33AQ14088 237 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 KARSQ15046 597 aaKnown RBP19.57■□□□□ 0.72
PNKP-225ENST00000636214 KYAT1Q16773 422 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 UVSSAQ2YD98 709 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 AXDND1Q5T1B0 1012 aaPredicted RBP19.57■□□□□ 0.72
PNKP-225ENST00000636214 HAUS6Q7Z4H7 955 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 SLC7A14Q8TBB6 771 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 MYADMQ96S97 322 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 REEP2Q9BRK0 252 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.57■□□□□ 0.72
PNKP-225ENST00000636214 BACE2Q9Y5Z0 518 aa19.57■□□□□ 0.72
PNKP-225ENST00000636214 ZFP37Q9Y6Q3 630 aaPredicted RBP19.57■□□□□ 0.72
PNKP-225ENST00000636214 H7C4K7 107 aa19.56■□□□□ 0.72
PNKP-225ENST00000636214 I3L4J1 428 aa19.56■□□□□ 0.72
PNKP-225ENST00000636214 ABLIM1O14639 778 aa19.56■□□□□ 0.72
PNKP-225ENST00000636214 CCL16O15467 120 aa19.56■□□□□ 0.72
PNKP-225ENST00000636214 N4BP1O75113 896 aaKnown RBP19.56■□□□□ 0.72
PNKP-225ENST00000636214 PAPLNO95428 1278 aa19.56■□□□□ 0.72
PNKP-225ENST00000636214 ELF1P32519 619 aa19.56■□□□□ 0.72
PNKP-225ENST00000636214 SOX4Q06945 474 aaPredicted RBP19.56■□□□□ 0.72
PNKP-225ENST00000636214 MCL1Q07820 350 aa19.56■□□□□ 0.72
PNKP-225ENST00000636214 MCM6Q14566 821 aa19.56■□□□□ 0.72
PNKP-225ENST00000636214 ASTLQ6HA08 431 aaPredicted RBP19.56■□□□□ 0.72
PNKP-225ENST00000636214 FLCNQ8NFG4 579 aa19.56■□□□□ 0.72
PNKP-225ENST00000636214 LARP4BQ92615 738 aaKnown RBP19.56■□□□□ 0.72
PNKP-225ENST00000636214 RAD54LQ92698 747 aa19.56■□□□□ 0.72
PNKP-225ENST00000636214 CCDC39Q9UFE4 941 aa19.56■□□□□ 0.72
PNKP-225ENST00000636214 STK25O00506 426 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms