RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 ZNF263O14978 683 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 IGKV5-2P06315 115 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 ITGA4P13612 1032 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 NMT1P30419 496 aaKnown RBP12.37□□□□□ -0.43
SHPRH-211ENST00000629427 RBP5P82980 135 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 CEP55Q53EZ4 464 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 FAM161BQ96MY7 647 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 ZFATQ9P243 1243 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 PKP3Q9Y446 797 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 CEP152O94986 1710 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 GH1P01241 217 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 GGCXP38435 758 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 DMC1Q14565 340 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 KIZQ2M2Z5 673 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 DHX40Q8IX18 779 aaKnown RBP12.37□□□□□ -0.43
SHPRH-211ENST00000629427 ZNRF3Q9ULT6 936 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 C3orf70A6NLC5 250 aaPredicted RBP12.37□□□□□ -0.43
SHPRH-211ENST00000629427 GOLGA8RI6L899 631 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 GGPS1O95749 300 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 TFRCP02786 760 aaKnown RBP12.37□□□□□ -0.43
SHPRH-211ENST00000629427 PDHA1P08559 390 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 ELMO2Q96JJ3 720 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 AGPAT1Q99943 283 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 AURKCQ9UQB9 309 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 GSG1L2A8MUP6 293 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 PSMD3O43242 534 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 BAATQ14032 418 aaPredicted RBP12.37□□□□□ -0.43
SHPRH-211ENST00000629427 LRRC14Q15048 493 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 NRKQ7Z2Y5 1582 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 STX19Q8N4C7 294 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 PABPC5Q96DU9 382 aaKnown RBP12.37□□□□□ -0.43
SHPRH-211ENST00000629427 MYCBPQ99417 103 aaPredicted RBP12.37□□□□□ -0.43
SHPRH-211ENST00000629427 SPATS2LQ9NUQ6 558 aaKnown RBP12.37□□□□□ -0.43
SHPRH-211ENST00000629427 ADCY10Q96PN6 1610 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 RSPH10B2B2RC85 870 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 RSPH10BP0C881 870 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 NFIXQ14938 502 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 PARK7Q99497 189 aaKnown RBP12.37□□□□□ -0.43
SHPRH-211ENST00000629427 DDX47Q9H0S4 455 aaKnown RBP12.37□□□□□ -0.43
SHPRH-211ENST00000629427 TAF1DQ9H5J8 278 aaPredicted RBP12.37□□□□□ -0.43
SHPRH-211ENST00000629427 C6orf203Q9P0P8 240 aaPredicted RBP12.37□□□□□ -0.43
SHPRH-211ENST00000629427 ARHGAP31Q2M1Z3 1444 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 EYA4O95677 639 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 ARFIP2P53365 341 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 SCARF1Q14162 830 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 SLC9A5Q14940 896 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 SNX17Q15036 470 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 EPHA7Q15375 998 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 MDH1BQ5I0G3 518 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 SYTL2Q9HCH5 934 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 SUPT3HO75486 399 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 RALBP11234 206 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 C11orf96Q7Z7L8 435 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 FAM84BQ96KN1 310 aaPredicted RBP12.36□□□□□ -0.43
SHPRH-211ENST00000629427 PRR36Q9H6K5 1346 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 IL10P22301 178 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 GYS2P54840 703 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 MED21Q13503 144 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 NCOA4Q13772 614 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 ADGRA2Q96PE1 1338 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 CD4P01730 458 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 PPP2R2AP63151 447 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 R3HDM1Q15032 1099 aaKnown RBP12.36□□□□□ -0.43
SHPRH-211ENST00000629427 HSPBP1Q9NZL4 362 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 AP3B1O00203 1094 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 HAUS5O94927 633 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 SNX31Q8N9S9 440 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 ALG13Q9NP73 1137 aaKnown RBP12.36□□□□□ -0.43
SHPRH-211ENST00000629427 LATS2Q9NRM7 1088 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 PRR23AA6NEV1 266 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 STXBP3O00186 592 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 ANGEL2Q5VTE6 544 aaKnown RBP12.36□□□□□ -0.43
SHPRH-211ENST00000629427 DNAJC7Q99615 494 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 TEX13BQ9BXU2 312 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 ECT2Q9H8V3 914 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 PFASO15067 1338 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 WDR19Q8NEZ3 1342 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 CDHR2Q9BYE9 1310 aa12.36□□□□□ -0.43
SHPRH-211ENST00000629427 GRID2IPA4D2P6 1211 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 GRAP2O75791 330 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 PRAMEF18Q5VWM3 479 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 NUP93Q8N1F7 819 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 PHF21AQ96BD5 680 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 MCEEQ96PE7 176 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 HPS4Q9NQG7 708 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 EHD2Q9NZN4 543 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 HDAC6Q9UBN7 1215 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 ZBTB12Q9Y330 459 aaPredicted RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 DDHD2O94830 711 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 FGFR4P22455 802 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 ARMC6Q6NXE6 501 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 HPS3Q969F9 1004 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 TIPINQ9BVW5 301 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 SCAF8Q9UPN6 1271 aaKnown RBP12.35□□□□□ -0.43
SHPRH-211ENST00000629427 SLC30A1Q9Y6M5 507 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 ANGPT2O15123 496 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 CENPAP49450 140 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 MAP3K10Q02779 954 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 CCDC157Q569K6 752 aa12.35□□□□□ -0.43
SHPRH-211ENST00000629427 EFCAB12Q6NXP0 572 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms