RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 ZC3H11AO75152 810 aaKnown RBP eCLIP20.42■□□□□ 0.86
MECP2-216ENST00000627864 ARHGEF15O94989 841 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 FGFR1OPO95684 399 aaKnown RBP20.42■□□□□ 0.86
MECP2-216ENST00000627864 NFICP08651 508 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 EPB41P11171 864 aaKnown RBP20.42■□□□□ 0.86
MECP2-216ENST00000627864 DNAJB2P25686 324 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 TMEM132DQ14C87 1099 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 PSMD6Q15008 389 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 FILIP1Q7Z7B0 1213 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 C18orf25Q96B23 403 aaPredicted RBP20.42■□□□□ 0.86
MECP2-216ENST00000627864 FNBP1Q96RU3 617 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 TSPAN18Q96SJ8 248 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 MKNK1Q9BUB5 465 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 SLC38A7Q9NVC3 462 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 DNAJB4Q9UDY4 337 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 DERAQ9Y315 318 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 SCN1AP35498 2009 aa20.42■□□□□ 0.86
MECP2-216ENST00000627864 PLXNA4Q9HCM2 1894 aa20.41■□□□□ 0.86
MECP2-216ENST00000627864 DLATP10515 647 aaKnown RBP20.41■□□□□ 0.86
MECP2-216ENST00000627864 KRT13P13646 458 aa20.41■□□□□ 0.86
MECP2-216ENST00000627864 TUSC3Q13454 348 aa20.41■□□□□ 0.86
MECP2-216ENST00000627864 NAB2Q15742 525 aa20.41■□□□□ 0.86
MECP2-216ENST00000627864 ZBTB6Q15916 424 aa20.41■□□□□ 0.86
MECP2-216ENST00000627864 CCDC40Q4G0X9 1142 aa20.41■□□□□ 0.86
MECP2-216ENST00000627864 LMBRD2Q68DH5 695 aaPredicted RBP20.41■□□□□ 0.86
MECP2-216ENST00000627864 EFCAB13Q8IY85 973 aa20.41■□□□□ 0.86
MECP2-216ENST00000627864 COLGALT2Q8IYK4 626 aa20.41■□□□□ 0.86
MECP2-216ENST00000627864 PLEKHO2Q8TD55 490 aa20.41■□□□□ 0.86
MECP2-216ENST00000627864 POP1Q99575 1024 aaKnown RBP20.41■□□□□ 0.86
MECP2-216ENST00000627864 NAT10Q9H0A0 1025 aaKnown RBP20.41■□□□□ 0.86
MECP2-216ENST00000627864 SLC28A3Q9HAS3 691 aa20.41■□□□□ 0.86
MECP2-216ENST00000627864 UBQLN1Q9UMX0 589 aaKnown RBP20.41■□□□□ 0.86
MECP2-216ENST00000627864 CASTOR2A6NHX0 329 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 SLC16A3O15427 465 aaKnown RBP20.4■□□□□ 0.86
MECP2-216ENST00000627864 XPOTO43592 962 aaKnown RBP20.4■□□□□ 0.86
MECP2-216ENST00000627864 LAG3P18627 525 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 TNNI1P19237 187 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 OR1G1P47890 313 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 BCAR1P56945 870 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 TFAMQ00059 246 aaKnown RBP20.4■□□□□ 0.86
MECP2-216ENST00000627864 TAP1Q03518 808 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 SOX4Q06945 474 aaPredicted RBP20.4■□□□□ 0.86
MECP2-216ENST00000627864 DSC1Q08554 894 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 SPATA1Q5VX52 437 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 PPP2R2DQ66LE6 453 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 INTS8Q75QN2 995 aaKnown RBP20.4■□□□□ 0.86
MECP2-216ENST00000627864 NT5DC4Q86YG4 428 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 COLGALT1Q8NBJ5 622 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 BEST2Q8NFU1 509 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 ENOX1Q8TC92 643 aaKnown RBP20.4■□□□□ 0.86
MECP2-216ENST00000627864 TMC2Q8TDI7 906 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 PARD3BQ8TEW8 1205 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 CACTINQ8WUQ7 758 aaKnown RBP20.4■□□□□ 0.86
MECP2-216ENST00000627864 RABGGTAQ92696 567 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 TIFAQ96CG3 184 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 FAM84AQ96KN4 292 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 GOLGA2P5Q9HBQ8 144 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 AAASQ9NRG9 546 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 CACNG4Q9UBN1 327 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 TUBGCP4Q9UGJ1 667 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 C2CD2Q9Y426 696 aa20.4■□□□□ 0.86
MECP2-216ENST00000627864 NT5C1B-RDH14C9J2C7 533 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 ALDH2P05091 517 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 PBX3P40426 434 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 SLC11A1P49279 550 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 ALDH7A1P49419 539 aaKnown RBP20.39■□□□□ 0.85
MECP2-216ENST00000627864 VAMP7P51809 220 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 GUCY2FP51841 1108 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 DLG4P78352 724 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 KCNT2Q6UVM3 1135 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 SPRED2Q7Z698 418 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 CREBRFQ8IUR6 639 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 TMEM130Q8N3G9 435 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 CLP1Q92989 425 aaKnown RBP20.39■□□□□ 0.85
MECP2-216ENST00000627864 ZNF558Q96NG5 402 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 TGS1Q96RS0 853 aaKnown RBP20.39■□□□□ 0.85
MECP2-216ENST00000627864 CGRRF1Q99675 332 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 TMEM175Q9BSA9 504 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 C17orf80Q9BSJ5 609 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 INTS13Q9NVM9 706 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 ARMCX3Q9UH62 379 aaPredicted RBP20.39■□□□□ 0.85
MECP2-216ENST00000627864 MTUS1Q9ULD2 1270 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 FAN1Q9Y2M0 1017 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 PCDHB12Q9Y5F1 795 aa20.39■□□□□ 0.85
MECP2-216ENST00000627864 PTPRJQ12913 1337 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 LRRIQ3A6PVS8 624 aaPredicted RBP20.38■□□□□ 0.85
MECP2-216ENST00000627864 SOX1O00570 391 aaPredicted RBP20.38■□□□□ 0.85
MECP2-216ENST00000627864 NRP1O14786 923 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 GALTP07902 379 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 TMEM191BP0C7N4 346 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 LINC00271P0C7V0 271 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 CYP3A5P20815 502 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 CTNNB1P35222 781 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 BMPR1AP36894 532 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 BFSP1Q12934 665 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 FRMD5Q7Z6J6 570 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 USP37Q86T82 979 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 WDR49Q8IV35 697 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 OR5B17Q8NGF7 314 aa20.38■□□□□ 0.85
MECP2-216ENST00000627864 BORCS6Q96GS4 357 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms