RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 MAML2Q8IZL2 1156 aaPredicted RBP18.14■□□□□ 0.49
TRIM29-221ENST00000627238 ITFG1Q8TB96 612 aa18.14■□□□□ 0.49
TRIM29-221ENST00000627238 IFT74Q96LB3 600 aa18.14■□□□□ 0.49
TRIM29-221ENST00000627238 LLPHQ9BRT6 129 aaKnown RBP18.14■□□□□ 0.49
TRIM29-221ENST00000627238 STK24Q9Y6E0 443 aa18.14■□□□□ 0.49
TRIM29-221ENST00000627238 R4GN57 208 aa18.14■□□□□ 0.49
TRIM29-221ENST00000627238 ARHGEF37A1IGU5 675 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 TRAPPC3O43617 180 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 GRM5P41594 1212 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 CLCNKBP51801 687 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 PDIA5Q14554 519 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 MLF2Q15773 248 aaPredicted RBP18.13■□□□□ 0.49
TRIM29-221ENST00000627238 ECM1Q16610 540 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 PABPC1LQ4VXU2 614 aaKnown RBP18.13■□□□□ 0.49
TRIM29-221ENST00000627238 SLC8B1Q6J4K2 584 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 C4orf32Q8N8J7 132 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 DDX27Q96GQ7 796 aaKnown RBP18.13■□□□□ 0.49
TRIM29-221ENST00000627238 FOXQ1Q9C009 403 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 PTPRHQ9HD43 1115 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 GDE1Q9NZC3 331 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 DNMT3BQ9UBC3 853 aaKnown RBP18.13■□□□□ 0.49
TRIM29-221ENST00000627238 FBXO4Q9UKT5 387 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 USP20Q9Y2K6 914 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 GDAQ9Y2T3 454 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 CDY1Q9Y6F8 540 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 PHLPP2Q6ZVD8 1323 aa18.13■□□□□ 0.49
TRIM29-221ENST00000627238 ECI2O75521 394 aa18.12■□□□□ 0.49
TRIM29-221ENST00000627238 SLC44A4Q53GD3 710 aa18.12■□□□□ 0.49
TRIM29-221ENST00000627238 SPECC1Q5M775 1068 aa18.12■□□□□ 0.49
TRIM29-221ENST00000627238 C3orf58Q8NDZ4 430 aa18.12■□□□□ 0.49
TRIM29-221ENST00000627238 FBXO18Q8NFZ0 1043 aa18.12■□□□□ 0.49
TRIM29-221ENST00000627238 KIFC3Q9BVG8 833 aa18.12■□□□□ 0.49
TRIM29-221ENST00000627238 BHMT2Q9H2M3 363 aa18.12■□□□□ 0.49
TRIM29-221ENST00000627238 TMEM134Q9H6X4 195 aa18.12■□□□□ 0.49
TRIM29-221ENST00000627238 TOPORSQ9NS56 1045 aaPredicted RBP18.12■□□□□ 0.49
TRIM29-221ENST00000627238 SMIM28A0A1B0GU29 152 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 K7ERI5 159 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 TBC1D4O60343 1298 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 MICAL2O94851 1124 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 ABLIM3O94929 683 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 IGFBP6P24592 240 aaPredicted RBP18.11■□□□□ 0.49
TRIM29-221ENST00000627238 TKTP29401 623 aaKnown RBP18.11■□□□□ 0.49
TRIM29-221ENST00000627238 FOSBP53539 338 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 SNW1Q13573 536 aaKnown RBP18.11■□□□□ 0.49
TRIM29-221ENST00000627238 ZNF174Q15697 407 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 GLRA4Q5JXX5 417 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 TTC38Q5R3I4 469 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 IGSF22Q8N9C0 903 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 SUMF1Q8NBK3 374 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 ZNF461Q8TAF7 563 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 C8orf76Q96K31 380 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 ACO2Q99798 780 aaKnown RBP18.11■□□□□ 0.49
TRIM29-221ENST00000627238 BCO2Q9BYV7 579 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 C17orf75Q9HAS0 396 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 SLC38A7Q9NVC3 462 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 HCFC1R1Q9NWW0 138 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 POLIQ9UNA4 740 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 CEP250Q9BV73 2442 aa18.11■□□□□ 0.49
TRIM29-221ENST00000627238 COL4A3Q01955 1670 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 SYN3O14994 580 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 KCNE1P15382 129 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 PROZP22891 400 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 CCT6AP40227 531 aaKnown RBP18.1■□□□□ 0.49
TRIM29-221ENST00000627238 GUCY1B3Q02153 619 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 SOX4Q06945 474 aaPredicted RBP18.1■□□□□ 0.49
TRIM29-221ENST00000627238 MRPL58Q14197 206 aaKnown RBP18.1■□□□□ 0.49
TRIM29-221ENST00000627238 ST13P5Q8NFI4 369 aaPredicted RBP18.1■□□□□ 0.49
TRIM29-221ENST00000627238 KCNG4Q8TDN1 519 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 RUBCNQ92622 972 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 CLDN23Q96B33 292 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 CCDC94Q9BW85 323 aaPredicted RBP18.1■□□□□ 0.49
TRIM29-221ENST00000627238 CDT1Q9H211 546 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 GOLGA2P5Q9HBQ8 144 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 LTB4R2Q9NPC1 389 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 ARHGAP28Q9P2N2 729 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 LIMCH1Q9UPQ0 1083 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 CITO14578 2027 aa18.1■□□□□ 0.49
TRIM29-221ENST00000627238 ABLIM1O14639 778 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 SPTLC1O15269 473 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 LRRN2O75325 713 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 RHOP08100 348 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 LIG1P18858 919 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 RPS9P46781 194 aaKnown RBP18.09■□□□□ 0.49
TRIM29-221ENST00000627238 NPTX2P47972 431 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 YARSP54577 528 aaKnown RBP18.09■□□□□ 0.49
TRIM29-221ENST00000627238 ROR1Q01973 937 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 SLC5A9Q2M3M2 681 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 TCEAL8Q8IYN2 117 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 DAW1Q8N136 415 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 CEP120Q8N960 986 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 NELL1Q92832 810 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 ELSPBP1Q96BH3 223 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 NELL2Q99435 816 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 DDX19AQ9NUU7 478 aaKnown RBP18.09■□□□□ 0.49
TRIM29-221ENST00000627238 CNTN3Q9P232 1028 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 LRWD1Q9UFC0 647 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 KIAA1024Q9UPX6 916 aa18.09■□□□□ 0.49
TRIM29-221ENST00000627238 MRPS23Q9Y3D9 190 aaKnown RBP18.09■□□□□ 0.49
TRIM29-221ENST00000627238 RBM19Q9Y4C8 960 aaKnown RBP18.09■□□□□ 0.49
TRIM29-221ENST00000627238 PDCD11Q14690 1871 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms