RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.26■□□□□ 0.67
PTCHD3-202ENST00000622555 TNNC2P02585 160 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 C4BPAP04003 597 aaKnown RBP19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 SLC9A1P19634 815 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 PON1P27169 355 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 RFC2P35250 354 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 ZACNQ401N2 412 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 TDRD10Q5VZ19 366 aaKnown RBP19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 C15orf39Q6ZRI6 1047 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 SLC24A5Q71RS6 500 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 LPPQ93052 612 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 KIF12Q96FN5 646 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 INTS2Q9H0H0 1204 aaKnown RBP19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 CXCL16Q9H2A7 254 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 C1orf112Q9NSG2 853 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 ZKSCAN5Q9Y2L8 839 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 MEIS3P2A8K0S8 358 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 C9IYK1 514 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 PHACTR2O75167 634 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 PTMAP06454 111 aaKnown RBP19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 TRIM21P19474 475 aaKnown RBP19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 ITGB8P26012 769 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 EPC2Q52LR7 807 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 ALKAL1Q6UXT8 129 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 FAM43BQ6ZT52 329 aaPredicted RBP19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 PPFIBP1Q86W92 1011 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 ECHDC2Q86YB7 292 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 FBXL13Q8NEE6 735 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 NEK11Q8NG66 645 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 TAS1R2Q8TE23 839 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 CACTINQ8WUQ7 758 aaKnown RBP19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 PGBD4Q96DM1 585 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 CNTN3Q9P232 1028 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 IMPACTQ9P2X3 320 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 C2CD2Q9Y426 696 aa19.25■□□□□ 0.67
PTCHD3-202ENST00000622555 MICAL3Q7RTP6 2002 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 ACTN1P12814 892 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 ATF7P17544 494 aaPredicted RBP19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 PIK3CAP42336 1068 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 TRIM14Q14142 442 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 TCTN1Q2MV58 587 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 GLRA4Q5JXX5 417 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 TRIM65Q6PJ69 517 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 TRAPPC11Q7Z392 1133 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 NT5DC4Q86YG4 428 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 EHBP1Q8NDI1 1231 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 CPLX3Q8WVH0 158 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 NUP58Q9BVL2 599 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 PRKAG2Q9UGJ0 569 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 DERAQ9Y315 318 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 COQ4Q9Y3A0 265 aa19.24■□□□□ 0.67
PTCHD3-202ENST00000622555 HLA-DRAP01903 254 aa19.23■□□□□ 0.67
PTCHD3-202ENST00000622555 TPM1P09493 284 aa19.23■□□□□ 0.67
PTCHD3-202ENST00000622555 APBA1Q02410 837 aa19.23■□□□□ 0.67
PTCHD3-202ENST00000622555 TBX2Q13207 712 aaPredicted RBP19.23■□□□□ 0.67
PTCHD3-202ENST00000622555 AGMOQ6ZNB7 445 aa19.23■□□□□ 0.67
PTCHD3-202ENST00000622555 TMEM199Q8N511 208 aa19.23■□□□□ 0.67
PTCHD3-202ENST00000622555 SEMA4DQ92854 862 aa19.23■□□□□ 0.67
PTCHD3-202ENST00000622555 ZMAT2Q96NC0 199 aaKnown RBP19.23■□□□□ 0.67
PTCHD3-202ENST00000622555 RNF19AQ9NV58 838 aa19.23■□□□□ 0.67
PTCHD3-202ENST00000622555 RAB20Q9NX57 234 aa19.23■□□□□ 0.67
PTCHD3-202ENST00000622555 GIT1Q9Y2X7 761 aa19.23■□□□□ 0.67
PTCHD3-202ENST00000622555 TDRD15B5MCY1 1934 aaKnown RBP19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 ENPP3O14638 875 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 EPHB6O15197 1021 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 VNN1O95497 513 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 GYPCP04921 128 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 MLH1P40692 756 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 XKR4Q5GH76 650 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 MFSD5Q6N075 450 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 ZNF598Q86UK7 904 aaKnown RBP19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 C7orf61Q8IZ16 206 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 LMO3Q8TAP4 145 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 ZFP42Q96MM3 310 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 RPS6KC1Q96S38 1066 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 GAD1Q99259 594 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 RSAD1Q9HA92 442 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 PLCB1Q9NQ66 1216 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 SMIM28A0A1B0GU29 152 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 ZNF500O60304 480 aaPredicted RBP19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 LRRN2O75325 713 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 KCNE1P15382 129 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 CSF2RAP15509 400 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 CASP14P31944 242 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 FAM189BP81408 668 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 LRMPQ12912 555 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 CNKSR3Q6P9H4 555 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 CCDC186Q7Z3E2 898 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 IQCDQ96DY2 449 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 TSPAN18Q96SJ8 248 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 SIX2Q9NPC8 291 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 UBN1Q9NPG3 1134 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 TTC3P53804 2025 aa19.22■□□□□ 0.67
PTCHD3-202ENST00000622555 ARL5CA6NH57 179 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 CCDC85CA6NKD9 419 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 NOL4O94818 638 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 CLSTN1O94985 981 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 EOMESO95936 686 aa19.21■□□□□ 0.67
PTCHD3-202ENST00000622555 KRT19P08727 400 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms