RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 CDR2Q01850 454 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 GFPT1Q06210 699 aaPredicted RBP7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 ZBTB17Q13105 803 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 HNRNPDQ14103 355 aaKnown RBP7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 KHDC1Q4VXA5 237 aaKnown RBP7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 PDXDC1Q6P996 788 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 LRRC8BQ6P9F7 803 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 C16orf86Q6ZW13 317 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 PHLDB2Q86SQ0 1253 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 TREML1Q86YW5 311 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 KBTBD2Q8IY47 623 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 REXO1Q8N1G1 1221 aaKnown RBP7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 TRPC4APQ8TEL6 797 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 COA7Q96BR5 231 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 NMD3Q96D46 503 aaKnown RBP7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 LRRC37BQ96QE4 947 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 UIMC1Q96RL1 719 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 TGS1Q96RS0 853 aaKnown RBP7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 ECSITQ9BQ95 431 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 EDEM3Q9BZQ6 932 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 DRC3Q9H069 523 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 KIAA1683Q9H0B3 1180 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 MRPL46Q9H2W6 279 aaKnown RBP7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 MMRN2Q9H8L6 949 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 C6orf50Q9HD87 102 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 CARD8Q9Y2G2 431 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 STARD13Q9Y3M8 1113 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 NUMBLQ9Y6R0 609 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 ATAD5Q96QE3 1844 aa7.97□□□□□ -1.13
TRIM49B-202ENST00000622138 GNPATO15228 680 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 TIMM44O43615 452 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 AP1G1O43747 822 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 MGEA5O60502 916 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 TLR2O60603 784 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 TBX10O75333 385 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 KRT36O76013 467 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 FTCDO95954 541 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 ARFIP2P53365 341 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 IFI35P80217 286 aaPredicted RBP7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 RELAQ04206 551 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 EHHADHQ08426 723 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 NSUN2Q08J23 767 aaKnown RBP eCLIP7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 KCNMA1Q12791 1236 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 RPS6KA1Q15418 735 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 CALCRLQ16602 461 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 MAN2A1Q16706 1144 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 HGSNATQ68CP4 663 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 CHADLQ6NUI6 762 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 KLHL35Q6PF15 583 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 SV2BQ7L1I2 683 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 MIGA2Q7L4E1 593 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 OTUD6AQ7L8S5 288 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 LRRC49Q8IUZ0 686 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 RASGEF1CQ8N431 466 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 NEDD1Q8NHV4 660 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 LARP4BQ92615 738 aaKnown RBP7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 RAD54LQ92698 747 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 DDX12PQ92771 950 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 CALML4Q96GE6 196 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 DDX50Q9BQ39 737 aaKnown RBP7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 NYXQ9GZU5 481 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 PARVBQ9HBI1 364 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 ZDHHC7Q9NXF8 308 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 DMTF1Q9Y222 760 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 CHKBQ9Y259 395 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 TSC22D4Q9Y3Q8 395 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 NOC2LQ9Y3T9 749 aaKnown RBP7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 ATP8B3O60423 1300 aa7.96□□□□□ -1.14
TRIM49B-202ENST00000622138 SH3PXD2BA1X283 911 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 SPECC1L-ADORA2AF8WAN1 911 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 DDX3XO00571 662 aaKnown RBP eCLIP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 PPP1R11O60927 126 aaPredicted RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 NEK3P51956 506 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 RHBDL3P58872 404 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 TUBA4AP68366 448 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 TBL3Q12788 808 aaKnown RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 UBE2SQ16763 222 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 TMEM119Q4V9L6 283 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 ACSBG2Q5FVE4 666 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 DEPDC1Q5TB30 811 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 FAAH2Q6GMR7 532 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 C1orf228Q6PIY5 440 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 LRRC47Q8N1G4 583 aaKnown RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 TUBB6Q9BUF5 446 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 KANSL2Q9H9L4 492 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 USP29Q9HBJ7 922 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 THEGQ9P2T0 379 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 TLDC2A0PJX2 215 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 TMEM120BA0PK00 339 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 ARHGAP10A1A4S6 786 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 FAM187AA6NFU0 413 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 FBP2O00757 339 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 KCNK3O14649 394 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 RASGRF2O14827 1237 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 MAGEB3O15480 346 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 STK10O94804 968 aaKnown RBP7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 NOL4O94818 638 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 ZWINTO95229 277 aa7.95□□□□□ -1.14
TRIM49B-202ENST00000622138 T-ENOLP0DO92 83 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms