RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	SCAF8	Q9UPN6	1271 aa	Known RBP	18.94	■□□□□ 0.62
CDK16-223	ENST00000622098	TESPA1	A2RU30	521 aa	Predicted RBP	18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	WDR64	B1ANS9	1081 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	ITIH2	P19823	946 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	RRM1	P23921	792 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	ITGA8	P53708	1063 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	CYP24A1	Q07973	514 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	PGM5	Q15124	567 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	HIBCH	Q6NVY1	386 aa	Predicted RBP	18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	TRPM8	Q7Z2W7	1104 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	ASNS	P08243	561 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	IBSP	P21815	317 aa	Predicted RBP	18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	HMGB2	P26583	209 aa	Known RBP	18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	MAP2K2	P36507	400 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	KYNU	Q16719	465 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	NBPF9	Q3BBW0	867 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	RHBDF2	Q6PJF5	856 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	FLAD1	Q8NFF5	587 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	MFSD14A	Q96MC6	490 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	PWWP2A	Q96N64	755 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	GGT7	Q9UJ14	662 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	SLC12A4	Q9UP95	1085 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	MROH7	Q68CQ1	1323 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	IVD	P26440	423 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	MCOLN2	Q8IZK6	566 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	GPATCH11	Q8N954	259 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	ANKRD42	Q8N9B4	389 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	TMC2	Q8TDI7	906 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	SERPINB12	Q96P63	405 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	FAM118B	Q9BPY3	351 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	HEMGN	Q9BXL5	484 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	KCNK9	Q9NPC2	374 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	ABCF3	Q9NUQ8	709 aa		18.93	■□□□□ 0.62
CDK16-223	ENST00000622098	TCP11X1	B4DZS4	312 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	HNRNPDL	O14979	420 aa	Known RBP	18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	TBC1D12	O60347	775 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	TTC4	O95801	387 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	UNG	P13051	313 aa	Predicted RBP	18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	FGFR1OP2	Q9NVK5	253 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	R3HDM2	Q9Y2K5	976 aa	Known RBP	18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	THAP12	O43422	761 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	SNX3	O60493	162 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	GAS8	O95995	478 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	APBA3	O96018	575 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	ADCY8	P40145	1251 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	JAK3	P52333	1124 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	MCCD1	P59942	119 aa	Predicted RBP	18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	LMBRD2	Q68DH5	695 aa	Predicted RBP	18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	USP37	Q86T82	979 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	CCDC50	Q8IVM0	306 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	SUPT20H	Q8NEM7	779 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	FBXL18	Q96ME1	805 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	RMDN3	Q96TC7	470 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	FAM213A	Q9BRX8	229 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	ANKEF1	Q9NU02	776 aa		18.92	■□□□□ 0.62
CDK16-223	ENST00000622098	ATF2	P15336	505 aa		18.91	■□□□□ 0.62
CDK16-223	ENST00000622098	GSC	P56915	257 aa	Predicted RBP	18.91	■□□□□ 0.62
CDK16-223	ENST00000622098	ELF3	P78545	371 aa	Predicted RBP	18.91	■□□□□ 0.62
CDK16-223	ENST00000622098	PTK6	Q13882	451 aa		18.91	■□□□□ 0.62
CDK16-223	ENST00000622098	VSTM1	Q6UX27	236 aa		18.91	■□□□□ 0.62
CDK16-223	ENST00000622098	DCLK3	Q9C098	648 aa		18.91	■□□□□ 0.62
CDK16-223	ENST00000622098	GCNT1	Q02742	428 aa		18.91	■□□□□ 0.62
CDK16-223	ENST00000622098	CEP170P1	Q96L14	293 aa		18.91	■□□□□ 0.62
CDK16-223	ENST00000622098	C1orf112	Q9NSG2	853 aa		18.91	■□□□□ 0.62
CDK16-223	ENST00000622098	ANAPC5	Q9UJX4	755 aa		18.91	■□□□□ 0.62
CDK16-223	ENST00000622098	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
CDK16-223	ENST00000622098	ADGRA3	Q8IWK6	1321 aa		18.91	■□□□□ 0.62
CDK16-223	ENST00000622098	BRWD3	Q6RI45	1802 aa		18.91	■□□□□ 0.62
CDK16-223	ENST00000622098		O00370	1275 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	MGRN1	O60291	552 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	GTF2H1	P32780	548 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	IRX3	P78415	501 aa	Predicted RBP	18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	GPD1L	Q8N335	351 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	GDAP1	Q8TB36	358 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	BICD1	Q96G01	975 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	TBK1	Q9UHD2	729 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	MYPN	Q86TC9	1320 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	GSTA1	P08263	222 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	RALA	P11233	206 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	SFN	P31947	248 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	NUGGC	Q68CJ6	796 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	CCDC63	Q8NA47	563 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	GRK7	Q8WTQ7	553 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	DDX27	Q96GQ7	796 aa	Known RBP	18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	GML	Q99445	158 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	TRAIP	Q9BWF2	469 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	GH1	P01241	217 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	ATP5D	P30049	168 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	MAN1A1	P33908	653 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	NSF	P46459	744 aa	Known RBP	18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	KRT76	Q01546	638 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	PREPL	Q4J6C6	727 aa	Predicted RBP	18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	MAIP1	Q8WWC4	291 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	TCP11	Q8WWU5	503 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	MYCBP	Q99417	103 aa	Predicted RBP	18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	PDCD2L	Q9BRP1	358 aa		18.9	■□□□□ 0.62
CDK16-223	ENST00000622098	ADCY1	Q08828	1119 aa		18.89	■□□□□ 0.61
CDK16-223	ENST00000622098	E2F5	Q15329	346 aa		18.89	■□□□□ 0.61
CDK16-223	ENST00000622098	SYDE1	Q6ZW31	735 aa	Predicted RBP	18.89	■□□□□ 0.61
CDK16-223	ENST00000622098	TBC1D1	Q86TI0	1168 aa	Predicted RBP	18.89	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms