RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 KCTD19Q17RG1 926 aaPredicted RBP10.1□□□□□ -0.79
PDPN-212ENST00000621990 SH3D19Q5HYK7 790 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 CRELD2Q6UXH1 353 aaPredicted RBP10.1□□□□□ -0.79
PDPN-212ENST00000621990 B4GALNT4Q76KP1 1039 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 DEFB132Q7Z7B7 95 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 MCOLN2Q8IZK6 566 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 ART4Q93070 314 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 BTBD6Q96KE9 485 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 PI4K2AQ9BTU6 479 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 TMEM109Q9BVC6 243 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 HOXC10Q9NYD6 342 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 CNTN6Q9UQ52 1028 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 AFG3L2Q9Y4W6 797 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 MROH7Q68CQ1 1323 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 ADGRA2Q96PE1 1338 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 OATP04181 439 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 SLC1A1P43005 524 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 LIG4P49917 911 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 BPIFB4P59827 614 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 PPP2R2AP63151 447 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 PTP4A2Q12974 167 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 ZNF568Q3ZCX4 644 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 TDRD10Q5VZ19 366 aaKnown RBP10.09□□□□□ -0.79
PDPN-212ENST00000621990 C10orf67Q8IYJ2 551 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 MYCBPAPQ8TBZ2 947 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 ZNF526Q8TF50 670 aaPredicted RBP10.09□□□□□ -0.79
PDPN-212ENST00000621990 BICD1Q96G01 975 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 PGM2Q96G03 612 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 HAPLN2Q9GZV7 340 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 SNX24Q9Y343 169 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 PPP2R3BQ9Y5P8 575 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 FAM169AQ9Y6X4 670 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 UTRNP46939 3433 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 PTPRJQ12913 1337 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 VNN1O95497 513 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 CPP00450 1065 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 KRT5P13647 590 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 GLRA2P23416 452 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 POLGP54098 1239 aaPredicted RBP10.09□□□□□ -0.79
PDPN-212ENST00000621990 PLTPP55058 493 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 WNT7BP56706 349 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 NLRP11P59045 1033 aaKnown RBP10.09□□□□□ -0.79
PDPN-212ENST00000621990 SLFN12LQ6IEE8 588 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 MON1BQ7L1V2 547 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 YTHDF3Q7Z739 585 aaKnown RBP10.09□□□□□ -0.79
PDPN-212ENST00000621990 HOOK3Q86VS8 718 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 NLRP14Q86W24 1093 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 CHST13Q8NET6 341 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 ASAP3Q8TDY4 903 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 PLVAPQ9BX97 442 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 LRRC4CQ9HCJ2 640 aa10.09□□□□□ -0.79
PDPN-212ENST00000621990 AGO2Q9UKV8 859 aaKnown RBP10.09□□□□□ -0.79
PDPN-212ENST00000621990 A0A0B4J269 797 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 DCDC2CA8MYV0 355 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 TP73O15350 636 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 TRAPPC3O43617 180 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 HLA-DRAP01903 254 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 HPDP32754 393 aaPredicted RBP10.08□□□□□ -0.8
PDPN-212ENST00000621990 STRN3Q13033 797 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 BYSLQ13895 437 aaKnown RBP10.08□□□□□ -0.8
PDPN-212ENST00000621990 STXBP2Q15833 593 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 KRT71Q3SY84 523 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 MTERF2Q49AM1 385 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 ANGEL2Q5VTE6 544 aaKnown RBP10.08□□□□□ -0.8
PDPN-212ENST00000621990 ZNF473Q8WTR7 871 aaKnown RBP10.08□□□□□ -0.8
PDPN-212ENST00000621990 RNF25Q96BH1 459 aaPredicted RBP10.08□□□□□ -0.8
PDPN-212ENST00000621990 CCT8L2Q96SF2 557 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 ZNF302Q9NR11 478 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 ANAPC7Q9UJX3 599 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 PASKQ96RG2 1323 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 A0A087WUV0 522 aaPredicted RBP10.08□□□□□ -0.8
PDPN-212ENST00000621990 TARBP2Q15633 366 aaKnown RBP10.08□□□□□ -0.8
PDPN-212ENST00000621990 TNFAIP8L3Q5GJ75 292 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 WDR44Q5JSH3 913 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 SMYD5Q6GMV2 418 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 TRIM72Q6ZMU5 477 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.08□□□□□ -0.8
PDPN-212ENST00000621990 PPM1EQ8WY54 764 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 ELMO3Q96BJ8 720 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 CENPTQ96BT3 561 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 VCPIP1Q96JH7 1222 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 CENPHQ9H3R5 247 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 TMEM134Q9H6X4 195 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 CNOT10Q9H9A5 744 aaKnown RBP10.08□□□□□ -0.8
PDPN-212ENST00000621990 MTRF1LQ9UGC7 380 aaKnown RBP10.08□□□□□ -0.8
PDPN-212ENST00000621990 NOVA2Q9UNW9 492 aaKnown RBP10.08□□□□□ -0.8
PDPN-212ENST00000621990 GJA3Q9Y6H8 435 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 CNTNAP2Q9UHC6 1331 aa10.08□□□□□ -0.8
PDPN-212ENST00000621990 LDHAP00338 332 aaKnown RBP10.07□□□□□ -0.8
PDPN-212ENST00000621990 SHBGP04278 402 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 RARGP13631 454 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 RRM1P23921 792 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 EDNRBP24530 442 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 MAPK4P31152 587 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 RFC5P40937 340 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 MAGOHP61326 146 aaKnown RBP10.07□□□□□ -0.8
PDPN-212ENST00000621990 CUL2Q13617 745 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 SLMAPQ14BN4 828 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 DENND2CQ68D51 928 aa10.07□□□□□ -0.8
PDPN-212ENST00000621990 SYDE1Q6ZW31 735 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms