RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 DENND4AQ7Z401 1863 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 H0YCG3 227 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 CLDN3O15551 220 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 TGM5O43548 720 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 TRAK2O60296 914 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 KCNE1P15382 129 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 SLC10A6Q3KNW5 377 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 C3orf58Q8NDZ4 430 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 PIK3R5Q8WYR1 880 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 UROC1Q96N76 676 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 CLSTN3Q9BQT9 956 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 CNTN3Q9P232 1028 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 CCDC39Q9UFE4 941 aa19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 MORC2Q9Y6X9 1032 aaPredicted RBP19.63■□□□□ 0.73
SCAMP4-213ENST00000621748 CCDC195A0A1B0GUA6 201 aa19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 K7ENM7 598 aa19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 RFPL2O75678 378 aa19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 NMT1P30419 496 aaKnown RBP19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 NASPP49321 788 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 NUCB2P80303 420 aa19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 ZXDAP98168 799 aa19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 ELAVL2Q12926 359 aaKnown RBP19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 RRAGBQ5VZM2 374 aa19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 C15orf39Q6ZRI6 1047 aa19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 CMASQ8NFW8 434 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 C18orf25Q96B23 403 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 BICD1Q96G01 975 aa19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 SLC38A7Q9NVC3 462 aa19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 TFIP11Q9UBB9 837 aaKnown RBP19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 STK17AQ9UEE5 414 aa19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 DOCK6Q96HP0 2047 aa19.62■□□□□ 0.73
SCAMP4-213ENST00000621748 ADAM12O43184 909 aa19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 TBCAO75347 108 aaKnown RBP19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 C1RP00736 705 aa19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 FGFR3P22607 806 aa19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 MATR3P43243 847 aaKnown RBP eCLIP19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 BRCC3P46736 316 aa19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 CREMQ03060 361 aa19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 PSMD5Q16401 504 aa19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 DYMQ7RTS9 669 aa19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 KRI1Q8N9T8 703 aaKnown RBP19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 LINC00301Q8NCQ3 95 aa19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 HDAC7Q8WUI4 952 aa19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 PANK2Q9BZ23 570 aa19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 PLEKHA4Q9H4M7 779 aa19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 DPP7Q9UHL4 492 aa19.61■□□□□ 0.73
SCAMP4-213ENST00000621748 A0A087X0B3 334 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 MYMKA6NI61 221 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 I3L4J1 428 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 PIGRP01833 764 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 CXCL8P10145 99 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 SCP2P22307 547 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 TXLNAP40222 546 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 LIG4P49917 911 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 GTF2BQ00403 316 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 PTPN21Q16825 1174 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 ZC2HC1CQ53FD0 456 aaPredicted RBP19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 FOXD4L5Q5VV16 416 aaPredicted RBP19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 SLC39A4Q6P5W5 647 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 KREMEN2Q8NCW0 462 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 FOXD4L4Q8WXT5 416 aaPredicted RBP19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 DDX12PQ92771 950 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 DDX27Q96GQ7 796 aaKnown RBP19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 USTQ9Y2C2 406 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 ATP6V1DQ9Y5K8 247 aa19.6■□□□□ 0.73
SCAMP4-213ENST00000621748 PODXLO00592 558 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 HNRNPDLO14979 420 aaKnown RBP19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 FAM189A1O60320 539 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 PAPLNO95428 1278 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 CLTAP09496 248 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 TKTP29401 623 aaKnown RBP19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 TNFSF9P41273 254 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 SPAG1Q07617 926 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 STK38Q15208 465 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 ZBTB41Q5SVQ8 909 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 ELMSAN1Q6PJG2 1045 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 RSPO2Q6UXX9 243 aaPredicted RBP19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 TRIM67Q6ZTA4 783 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 HFE2Q6ZVN8 426 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 SV2BQ7L1I2 683 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 TMEM130Q8N3G9 435 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 TDRD5Q8NAT2 981 aaKnown RBP19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 ZNF707Q96C28 371 aaPredicted RBP19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 DNAJC19Q96DA6 116 aa19.59■□□□□ 0.73
SCAMP4-213ENST00000621748 TTC26A0AVF1 554 aa19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 TRAPPC3O43617 180 aa19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 ZSCAN22P10073 491 aaPredicted RBP19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 RPL9P32969 192 aaKnown RBP19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 PDXDC1Q6P996 788 aa19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 CCDC73Q6ZRK6 1079 aa19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 CCDC149Q6ZUS6 474 aa19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 SFR1Q86XK3 245 aa19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 MAP4K3Q8IVH8 894 aa19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 ZDHHC14Q8IZN3 488 aa19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 RHOBTB2Q9BYZ6 727 aa19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 ST6GALNAC4Q9H4F1 302 aa19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 PLEKHA5Q9HAU0 1116 aa19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 MTRRQ9UBK8 725 aa19.58■□□□□ 0.72
SCAMP4-213ENST00000621748 LIMD1Q9UGP4 676 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms