RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 SLC1A1P43005 524 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 CETN1Q12798 172 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 LRRC14Q15048 493 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 RASA2Q15283 850 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 PARP6Q2NL67 630 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 CMPK2Q5EBM0 449 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 SLC27A3Q5K4L6 730 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 SLC39A4Q6P5W5 647 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 ANKS1BQ7Z6G8 1248 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 KIRREL3Q8IZU9 778 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 RDH13Q8NBN7 331 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 UHMK1Q8TAS1 419 aaKnown RBP13.96□□□□□ -0.18
SKP2-209ENST00000620197 PCIF1Q9H4Z3 704 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 KIAA1217Q5T5P2 1943 aa13.96□□□□□ -0.18
SKP2-209ENST00000620197 ARHGEF35A5YM69 484 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 TMEM110-MUSTN1A8MSY1 372 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 PRPF4O43172 522 aaKnown RBP eCLIP13.95□□□□□ -0.18
SKP2-209ENST00000620197 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
SKP2-209ENST00000620197 UNC5CO95185 931 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 FDX1P10109 184 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 WDR4P57081 412 aaKnown RBP13.95□□□□□ -0.18
SKP2-209ENST00000620197 NSMCE1Q8WV22 266 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 C1orf54Q8WWF1 131 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 TCP11Q8WWU5 503 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 ZNF653Q96CK0 615 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 LARSQ9P2J5 1176 aaKnown RBP13.95□□□□□ -0.18
SKP2-209ENST00000620197 STARD13Q9Y3M8 1113 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 UBIAD1Q9Y5Z9 338 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 LIN7AO14910 233 aaPredicted RBP13.95□□□□□ -0.18
SKP2-209ENST00000620197 ACSL3O95573 720 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 P4HBP07237 508 aaKnown RBP13.95□□□□□ -0.18
SKP2-209ENST00000620197 GCNT1Q02742 428 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 CALCOCO2Q13137 446 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 MAP4K3Q8IVH8 894 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 MCOLN2Q8IZK6 566 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 RIBC1Q8N443 379 aaPredicted RBP13.95□□□□□ -0.18
SKP2-209ENST00000620197 GRAMD1AQ96CP6 724 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 LRMDAQ9H2I8 198 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 BATF3Q9NR55 127 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 COL20A1Q9P218 1284 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 L3MBTL1Q9Y468 752 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 LCTP09848 1927 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 YARSP54577 528 aaKnown RBP13.95□□□□□ -0.18
SKP2-209ENST00000620197 SGO2Q562F6 1265 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 MON1BQ7L1V2 547 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 HAUS6Q7Z4H7 955 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 SYCP3Q8IZU3 236 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 TMEM161BQ8NDZ6 487 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 TBC1D31Q96DN5 1066 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 ANKRD27Q96NW4 1050 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 TMEM237Q96Q45 408 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 AGO4Q9HCK5 861 aaKnown RBP13.95□□□□□ -0.18
SKP2-209ENST00000620197 NAALADL1Q9UQQ1 740 aa13.95□□□□□ -0.18
SKP2-209ENST00000620197 ASTN2O75129 1339 aaPredicted RBP13.94□□□□□ -0.18
SKP2-209ENST00000620197 A8MUI8 341 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 TRAFD1O14545 582 aaPredicted RBP13.94□□□□□ -0.18
SKP2-209ENST00000620197 MSH2P43246 934 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 SNRNP35Q16560 246 aaKnown RBP13.94□□□□□ -0.18
SKP2-209ENST00000620197 KRT39Q6A163 491 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 ZCCHC9Q8N567 271 aaKnown RBP13.94□□□□□ -0.18
SKP2-209ENST00000620197 MAIP1Q8WWC4 291 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 NTPCRQ9BSD7 190 aaKnown RBP13.94□□□□□ -0.18
SKP2-209ENST00000620197 TRIM7Q9C029 511 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 BAIAP2L1Q9UHR4 511 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 GRID1Q9ULK0 1009 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 CD2APQ9Y5K6 639 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 SPOPO43791 374 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 ZC3H11AO75152 810 aaKnown RBP eCLIP13.94□□□□□ -0.18
SKP2-209ENST00000620197 CDH16O75309 829 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 CFBP00751 764 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 CLTAP09496 248 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 MYBL1P10243 752 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 RRM1P23921 792 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 RXRBP28702 533 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 PTGER2P43116 358 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 CCNG2Q16589 344 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 KYNUQ16719 465 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 RBM26Q5T8P6 1007 aaKnown RBP13.94□□□□□ -0.18
SKP2-209ENST00000620197 DRICH1Q6PGQ1 229 aaPredicted RBP13.94□□□□□ -0.18
SKP2-209ENST00000620197 OTUD6AQ7L8S5 288 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 CBWD2Q8IUF1 395 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 ATL2Q8NHH9 583 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 GRK7Q8WTQ7 553 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 ATG4AQ8WYN0 398 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 FOXP3Q9BZS1 431 aa13.94□□□□□ -0.18
SKP2-209ENST00000620197 HERC5Q9UII4 1024 aaKnown RBP13.94□□□□□ -0.18
SKP2-209ENST00000620197 FAM170AA1A519 330 aa13.93□□□□□ -0.18
SKP2-209ENST00000620197 RPSAP08865 295 aaKnown RBP13.93□□□□□ -0.18
SKP2-209ENST00000620197 CLNS1AP54105 237 aaKnown RBP13.93□□□□□ -0.18
SKP2-209ENST00000620197 NUGGCQ68CJ6 796 aa13.93□□□□□ -0.18
SKP2-209ENST00000620197 KATNAL2Q8IYT4 538 aa13.93□□□□□ -0.18
SKP2-209ENST00000620197 SLC17A8Q8NDX2 589 aa13.93□□□□□ -0.18
SKP2-209ENST00000620197 ACER1Q8TDN7 264 aa13.93□□□□□ -0.18
SKP2-209ENST00000620197 CLEC4DQ8WXI8 215 aa13.93□□□□□ -0.18
SKP2-209ENST00000620197 PRCCQ92733 491 aaPredicted RBP13.93□□□□□ -0.18
SKP2-209ENST00000620197 TGS1Q96RS0 853 aaKnown RBP13.93□□□□□ -0.18
SKP2-209ENST00000620197 TLE6Q9H808 572 aa13.93□□□□□ -0.18
SKP2-209ENST00000620197 UBN1Q9NPG3 1134 aa13.93□□□□□ -0.18
SKP2-209ENST00000620197 KCNH7Q9NS40 1196 aa13.93□□□□□ -0.18
SKP2-209ENST00000620197 CNTNAP1P78357 1384 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms