RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 LARSQ9P2J5 1176 aaKnown RBP10.12□□□□□ -0.79
SYN3-213ENST00000619146 DNAJB4Q9UDY4 337 aa10.12□□□□□ -0.79
SYN3-213ENST00000619146 COL1A2P08123 1366 aa10.12□□□□□ -0.79
SYN3-213ENST00000619146 CFAP47Q6ZTR5 3102 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 USP24Q9UPU5 2620 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 TMEM150BA6NC51 233 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 C2CD2LO14523 706 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 HOXA2O43364 376 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 KLRC4O43908 158 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 B4GALT3O60512 393 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 KIF20AO95235 890 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 LMNAP02545 664 aaKnown RBP10.11□□□□□ -0.79
SYN3-213ENST00000619146 GBP2P32456 591 aaPredicted RBP10.11□□□□□ -0.79
SYN3-213ENST00000619146 ABCD1P33897 745 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 EHHADHQ08426 723 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 TBC1D8BQ0IIM8 1120 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 STIM1Q13586 685 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 EMC2Q15006 297 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 FAM26FQ5R3K3 315 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 CCDC149Q6ZUS6 474 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 STXBP4Q6ZWJ1 553 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 TCP11Q8WWU5 503 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 ACSF2Q96CM8 615 aaPredicted RBP10.11□□□□□ -0.79
SYN3-213ENST00000619146 SH2D3AQ9BRG2 576 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 VN1R3Q9BXE9 311 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 ADAMTS10Q9H324 1103 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 OLFML3Q9NRN5 406 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 DZANK1Q9NVP4 752 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 DUSP12Q9UNI6 340 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 SPAG17Q6Q759 2223 aa10.11□□□□□ -0.79
SYN3-213ENST00000619146 CNOT1A5YKK6 2376 aaKnown RBP10.1□□□□□ -0.79
SYN3-213ENST00000619146 NPHP3-ACAD11A0A0J9YXS1 232 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 H0YCG3 227 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 N4BP1O75113 896 aaKnown RBP10.1□□□□□ -0.79
SYN3-213ENST00000619146 HIP1RO75146 1068 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 LRRN2O75325 713 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 MAFO75444 373 aaPredicted RBP10.1□□□□□ -0.79
SYN3-213ENST00000619146 SPATA31D3P0C874 917 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 MAPTP10636 758 aaKnown RBP10.1□□□□□ -0.79
SYN3-213ENST00000619146 PLS3P13797 630 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 EIF4BP23588 611 aaKnown RBP10.1□□□□□ -0.79
SYN3-213ENST00000619146 KLRC2P26717 231 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 ERCC5P28715 1186 aaPredicted RBP10.1□□□□□ -0.79
SYN3-213ENST00000619146 DNM2P50570 870 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 RNASELQ05823 741 aaKnown RBP10.1□□□□□ -0.79
SYN3-213ENST00000619146 RAD51AP2Q09MP3 1159 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 MAPK7Q13164 816 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 DMP1Q13316 513 aaPredicted RBP10.1□□□□□ -0.79
SYN3-213ENST00000619146 DRP2Q13474 957 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 ALCAMQ13740 583 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 PPP2R5AQ15172 486 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 DPCR1Q3MIW9 517 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 COBLL1Q53SF7 1204 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 SPATA31D4Q6ZUB0 917 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 OTOP3Q7RTS5 596 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 GPR149Q86SP6 731 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 MYCT1Q8N699 235 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 NLRP7Q8WX94 980 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 IFT74Q96LB3 600 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 CEP89Q96ST8 783 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 MAP7D2Q96T17 732 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 RTP3Q9BQQ7 232 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 NRDE2Q9H7Z3 1164 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 MRPL44Q9H9J2 332 aaKnown RBP10.1□□□□□ -0.79
SYN3-213ENST00000619146 TBC1D17Q9HA65 648 aa10.1□□□□□ -0.79
SYN3-213ENST00000619146 IGKV6-21A0A0C4DH24 114 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 PSMA7O14818 248 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 CNPP09543 421 aaKnown RBP10.09□□□□□ -0.79
SYN3-213ENST00000619146 CTSAP10619 480 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 BMP6P22004 513 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 TMOD1P28289 359 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 SLC11A1P49279 550 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 ZNF165P49910 485 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 GPC3P51654 580 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 SMTNP53814 917 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 MXD4Q14582 209 aaPredicted RBP10.09□□□□□ -0.79
SYN3-213ENST00000619146 BMS1Q14692 1282 aaKnown RBP10.09□□□□□ -0.79
SYN3-213ENST00000619146 PTPN14Q15678 1187 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 RSPO4Q2I0M5 234 aaPredicted RBP10.09□□□□□ -0.79
SYN3-213ENST00000619146 ANO6Q4KMQ2 910 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 ISM2Q6H9L7 571 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 TWF2Q6IBS0 349 aaKnown RBP10.09□□□□□ -0.79
SYN3-213ENST00000619146 MAEAQ7L5Y9 396 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 ZNF598Q86UK7 904 aaKnown RBP10.09□□□□□ -0.79
SYN3-213ENST00000619146 SFR1Q86XK3 245 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 GLYCTKQ8IVS8 523 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 DAW1Q8N136 415 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 ZNF710Q8N1W2 664 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 GUF1Q8N442 669 aaKnown RBP10.09□□□□□ -0.79
SYN3-213ENST00000619146 GPR152Q8TDT2 470 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 SPIRE2Q8WWL2 714 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 PSPC1Q8WXF1 523 aaKnown RBP10.09□□□□□ -0.79
SYN3-213ENST00000619146 DHTKD1Q96HY7 919 aaPredicted RBP10.09□□□□□ -0.79
SYN3-213ENST00000619146 IGSF21Q96ID5 467 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 KLHL5Q96PQ7 755 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 MYADMQ96S97 322 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 BPIFA3Q9BQP9 254 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 NTPCRQ9BSD7 190 aaKnown RBP10.09□□□□□ -0.79
SYN3-213ENST00000619146 FOXQ1Q9C009 403 aa10.09□□□□□ -0.79
SYN3-213ENST00000619146 POLR3FQ9H1D9 316 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms