RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 PSEN2P49810 448 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 BMS1Q14692 1282 aaKnown RBP13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 FSCN1Q16658 493 aaKnown RBP13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 WDR44Q5JSH3 913 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 PAPD7Q5XG87 772 aaKnown RBP13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 CTAGE6Q86UF2 777 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 CTAGE4Q8IX94 777 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 SLC20A1Q8WUM9 679 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 DHX38Q92620 1227 aaKnown RBP13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 PNKPQ96T60 521 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 KATNAL1Q9BW62 490 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 CDT1Q9H211 546 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 PTPRHQ9HD43 1115 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 TNFSF13BQ9Y275 285 aa13.69□□□□□ -0.22
TNFAIP3-209ENST00000619035 PDE2AO00408 941 aaPredicted RBP13.68□□□□□ -0.22
TNFAIP3-209ENST00000619035 PJA2O43164 708 aa13.68□□□□□ -0.22
TNFAIP3-209ENST00000619035 DUSP11O75319 330 aaKnown RBP13.68□□□□□ -0.22
TNFAIP3-209ENST00000619035 ERLIN2O94905 339 aa13.68□□□□□ -0.22
TNFAIP3-209ENST00000619035 VNN1O95497 513 aa13.68□□□□□ -0.22
TNFAIP3-209ENST00000619035 MAP2K2P36507 400 aa13.68□□□□□ -0.22
TNFAIP3-209ENST00000619035 FAM187BQ17R55 369 aa13.68□□□□□ -0.22
TNFAIP3-209ENST00000619035 SPOPLQ6IQ16 392 aa13.68□□□□□ -0.22
TNFAIP3-209ENST00000619035 LNX1Q8TBB1 728 aaPredicted RBP13.68□□□□□ -0.22
TNFAIP3-209ENST00000619035 SMARCAL1Q9NZC9 954 aa13.68□□□□□ -0.22
TNFAIP3-209ENST00000619035 CPSF3Q9UKF6 684 aaKnown RBP13.68□□□□□ -0.22
TNFAIP3-209ENST00000619035 MYADML2A6NDP7 307 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 CYP26A1O43174 497 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 TACC1O75410 805 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 CYP2C9P11712 490 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 KRT5P13647 590 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 ANXA13P27216 316 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 DNA2P51530 1060 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 NKX3-2P78367 333 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 SP3Q02447 781 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 TRIM32Q13049 653 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 NAB2Q15742 525 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 AMHR2Q16671 573 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 RUFY4Q6ZNE9 571 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 TMEM192Q8IY95 271 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 ALS2CR12Q96Q35 445 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 MTMR12Q9C0I1 747 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 ACP6Q9NPH0 428 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 SGPL1O95470 568 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 CXCL8P10145 99 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 ARF4P18085 180 aaPredicted RBP13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 TNFAIP3P21580 790 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 ZNF200P98182 395 aaPredicted RBP13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 TFAMQ00059 246 aaKnown RBP13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 CAP1Q01518 475 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 HIC1Q14526 733 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 TAF3Q5VWG9 929 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 ZNF410Q86VK4 478 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 WDR49Q8IV35 697 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 TRIM58Q8NG06 486 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 COG1Q8WTW3 980 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 SHC3Q92529 594 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 NOX5Q96PH1 765 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 PDZD7Q9H5P4 517 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 EHD2Q9NZN4 543 aa13.67□□□□□ -0.22
TNFAIP3-209ENST00000619035 GPR25O00155 361 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 HAS3O00219 553 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 PGK1P00558 417 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 GNRH1P01148 92 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 CYBAP13498 195 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 HOXD10P28358 340 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 POU5F1Q01860 360 aaKnown RBP13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 TUBB2AQ13885 445 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 PTPROQ16827 1216 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 GNASQ5JWF2 1037 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 C10orf76Q5T2E6 689 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 TMCO3Q6UWJ1 677 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 SLC47A2Q86VL8 602 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 FAM71AQ8IYT1 594 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 FAM81BQ96LP2 452 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 AGPAT1Q99943 283 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 TUBB2BQ9BVA1 445 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 TREHO43280 583 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 TSPAN1O60635 241 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 ZC3H11AO75152 810 aaKnown RBP eCLIP13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 TMEM191BP0C7N4 346 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 ELNP15502 786 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 AP3M2P53677 418 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 PURAQ00577 322 aaKnown RBP13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 GCNT1Q02742 428 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 NCOA4Q13772 614 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 PCBP1Q15365 356 aaKnown RBP eCLIP13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 SCARA3Q6AZY7 606 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 PALB2Q86YC2 1186 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 RPUSD2Q8IZ73 545 aaKnown RBP13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 C7orf31Q8N865 590 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 OLIG1Q8TAK6 271 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 CAGE1Q8TC20 777 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 DNAJB3Q8WWF6 145 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 OSMRQ99650 979 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 HINFPQ9BQA5 517 aa13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 ARGLU1Q9NWB6 273 aaPredicted RBP13.66□□□□□ -0.22
TNFAIP3-209ENST00000619035 MBLAC1A4D2B0 266 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP3-209ENST00000619035 TRPA1O75762 1119 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms