RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 ITGB1BP2Q9UKP3 347 aa12.93□□□□□ -0.34
SRRT-216ENST00000618262 PCDHA5Q9Y5H7 936 aa12.93□□□□□ -0.34
SRRT-216ENST00000618262 RBBP6Q7Z6E9 1792 aaKnown RBP12.93□□□□□ -0.34
SRRT-216ENST00000618262 MYMKA6NI61 221 aa12.93□□□□□ -0.34
SRRT-216ENST00000618262 LIN7AO14910 233 aaPredicted RBP12.93□□□□□ -0.34
SRRT-216ENST00000618262 P4HBP07237 508 aaKnown RBP12.93□□□□□ -0.34
SRRT-216ENST00000618262 TUBA1BP68363 451 aa12.93□□□□□ -0.34
SRRT-216ENST00000618262 TUBA1AQ71U36 451 aa12.93□□□□□ -0.34
SRRT-216ENST00000618262 FAM71BQ8TC56 605 aa12.93□□□□□ -0.34
SRRT-216ENST00000618262 FRS2Q8WU20 508 aa12.93□□□□□ -0.34
SRRT-216ENST00000618262 ABCG4Q9H172 646 aa12.93□□□□□ -0.34
SRRT-216ENST00000618262 SETD4Q9NVD3 440 aa12.93□□□□□ -0.34
SRRT-216ENST00000618262 XPO7Q9UIA9 1087 aaKnown RBP12.93□□□□□ -0.34
SRRT-216ENST00000618262 LGALS2P05162 132 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 ICAM3P32942 547 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 HOXD12P35452 270 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 EPHA7Q15375 998 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 FSCN1Q16658 493 aaKnown RBP12.92□□□□□ -0.34
SRRT-216ENST00000618262 NIPA1Q7RTP0 329 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 ZNF467Q7Z7K2 595 aaPredicted RBP12.92□□□□□ -0.34
SRRT-216ENST00000618262 TTC39CQ8N584 583 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 GPR161Q8N6U8 529 aaKnown RBP12.92□□□□□ -0.34
SRRT-216ENST00000618262 SPACA7Q96KW9 195 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 NR1H4Q96RI1 486 aaPredicted RBP12.92□□□□□ -0.34
SRRT-216ENST00000618262 NRDE2Q9H7Z3 1164 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 GNEQ9Y223 722 aaKnown RBP12.92□□□□□ -0.34
SRRT-216ENST00000618262 MMP3P08254 477 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 LONRF2Q1L5Z9 754 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 IQSEC1Q6DN90 963 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 ESX1Q8N693 406 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 PAF1Q8N7H5 531 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 LINC00469Q8N7U9 141 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 AK8Q96MA6 479 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 FGFBP2Q9BYJ0 223 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 MRPL46Q9H2W6 279 aaKnown RBP12.92□□□□□ -0.34
SRRT-216ENST00000618262 ZSWIM4Q9H7M6 989 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 HMX1Q9NP08 348 aaPredicted RBP12.92□□□□□ -0.34
SRRT-216ENST00000618262 GMEB1Q9Y692 573 aa12.92□□□□□ -0.34
SRRT-216ENST00000618262 ARHGEF35A5YM69 484 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 H3BRB1 525 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 PDGFRBP09619 1106 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 FAM102BQ5T8I3 360 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 ZNF746Q6NUN9 644 aaPredicted RBP12.91□□□□□ -0.34
SRRT-216ENST00000618262 B3GNT9Q6UX72 402 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 SNX32Q86XE0 403 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 FAM200AQ8TCP9 573 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 RAD54LQ92698 747 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 CTAGE1Q96RT6 745 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 CCSER1Q9C0I3 900 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 FAM49AQ9H0Q0 323 aaPredicted RBP12.91□□□□□ -0.34
SRRT-216ENST00000618262 TUT1Q9H6E5 874 aaKnown RBP12.91□□□□□ -0.34
SRRT-216ENST00000618262 SEPT4O43236 478 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 TADA3O75528 432 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 RASSF9O75901 435 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 ARHGAP25P42331 645 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 PSMC5P62195 406 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 LAMC2Q13753 1193 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 KCNA10Q16322 511 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 CCDC40Q4G0X9 1142 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 SV2BQ7L1I2 683 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.91□□□□□ -0.34
SRRT-216ENST00000618262 APPL2Q8NEU8 664 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 CACTINQ8WUQ7 758 aaKnown RBP12.91□□□□□ -0.34
SRRT-216ENST00000618262 RABGGTAQ92696 567 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 CFHR5Q9BXR6 569 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 GTF3C4Q9UKN8 822 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 GDAQ9Y2T3 454 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 MGAMO43451 1857 aa12.91□□□□□ -0.34
SRRT-216ENST00000618262 ASGR1P07306 291 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 CCDC38Q502W7 563 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 ARSHQ5FYA8 562 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 ZNF449Q6P9G9 518 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 RSPH3Q86UC2 560 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 C11orf74Q86VG3 221 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
SRRT-216ENST00000618262 CLSTN2Q9H4D0 955 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 FBXL5Q9UKA1 691 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 LUC7L2Q9Y383 392 aaKnown RBP12.9□□□□□ -0.34
SRRT-216ENST00000618262 TTLL3Q9Y4R7 772 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 TUBB4AP04350 444 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 CTCFP49711 727 aaPredicted RBP12.9□□□□□ -0.34
SRRT-216ENST00000618262 JAK3P52333 1124 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 STX17P56962 302 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 PHEXP78562 749 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
SRRT-216ENST00000618262 PLCB4Q15147 1175 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 PADI6Q6TGC4 694 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 NOC3LQ8WTT2 800 aaKnown RBP12.9□□□□□ -0.34
SRRT-216ENST00000618262 ATP6V0A1Q93050 837 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 HOOK1Q9UJC3 728 aaKnown RBP12.9□□□□□ -0.34
SRRT-216ENST00000618262 SZT2Q5T011 3432 aa12.9□□□□□ -0.34
SRRT-216ENST00000618262 PRSS47A8MTI9 375 aa12.9□□□□□ -0.35
SRRT-216ENST00000618262 CLCN3P51790 818 aa12.9□□□□□ -0.35
SRRT-216ENST00000618262 PPIDQ08752 370 aaKnown RBP12.9□□□□□ -0.35
SRRT-216ENST00000618262 PAK2Q13177 524 aa12.9□□□□□ -0.35
SRRT-216ENST00000618262 DGKDQ16760 1214 aa12.9□□□□□ -0.35
SRRT-216ENST00000618262 IRGCQ6NXR0 463 aa12.9□□□□□ -0.35
SRRT-216ENST00000618262 NELL1Q92832 810 aa12.9□□□□□ -0.35
SRRT-216ENST00000618262 LRRC45Q96CN5 670 aa12.9□□□□□ -0.35
SRRT-216ENST00000618262 MAELQ96JY0 434 aaKnown RBP12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms