RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 GRM3Q14832 879 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 ACAP2Q15057 778 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 KAZNQ674X7 775 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 POTEAQ6S8J7 498 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 C7orf57Q8NEG2 295 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 NKD2Q969F2 451 aaPredicted RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 TTC14Q96N46 770 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 TTYH1Q9H313 450 aaPredicted RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 DNAJC17Q9NVM6 304 aaKnown RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 STARD13Q9Y3M8 1113 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 SNX9Q9Y5X1 595 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 OPHN1O60890 802 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 DDHD2O94830 711 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 MAP4P27816 1152 aaKnown RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 CCR3P51677 355 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 INHBCP55103 352 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 MXRA7P84157 204 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 BNC1Q01954 994 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 CDCA7LQ96GN5 454 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 IER2Q9BTL4 223 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 TSGA10Q9BZW7 698 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 TLR8Q9NR97 1041 aaKnown RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 VPS54Q9P1Q0 977 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 FTSJ1Q9UET6 329 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 A0A1B0GUL6 1792 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 AOX1Q06278 1338 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 FER1L6Q2WGJ9 1857 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 HNF1AP20823 631 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 BDH1Q02338 343 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 PPP1R7Q15435 360 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 ATL3Q6DD88 541 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 NLRP9Q7RTR0 991 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 MAFAQ8NHW3 353 aaPredicted RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 EPAS1Q99814 870 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 GHRLQ9UBU3 117 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 DDX49Q9Y6V7 483 aaKnown RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 DNM1LO00429 736 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 FOXK1P85037 733 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 IFFO1Q0D2I5 559 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 BRINP2Q9C0B6 783 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 CAAP1Q9H8G2 361 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 USH1CQ9Y6N9 552 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 DOCK5Q9H7D0 1870 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 PDS5AQ29RF7 1337 aaKnown RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 AP5Z1O43299 807 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 TP53P04637 393 aaPredicted RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 CCNYL3P0C7X3 344 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 ADD1P35611 737 aaKnown RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 MFSD10Q14728 455 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 CTXN3Q4LDR2 81 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 UBXN4Q92575 508 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 PLEKHA4Q9H4M7 779 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 PCDHA12Q9UN75 941 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 PCDHGB5Q9Y5G0 923 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 SMCO2A6NFE2 343 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 CIAO1O76071 339 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 CDH8P55286 799 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 RTP1P59025 263 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 ACSM2AQ08AH3 577 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 TNNI3KQ59H18 835 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 MCEMP1Q8IX19 187 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 STAG1Q8WVM7 1258 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 NDRG2Q9UN36 371 aaKnown RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 HAX1O00165 279 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 CLGNO14967 610 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 CLDN3O15551 220 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 MYL1P05976 194 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 CCDC122Q5T0U0 273 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 DEPDC4Q8N2C3 294 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 GIMAP7Q8NHV1 300 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 TEKT2Q9UIF3 430 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 CD207Q9UJ71 328 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 SLC45A1Q9Y2W3 748 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 ENTPD5O75356 428 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 USP17L7P0C7H9 530 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 ZSCAN22P10073 491 aaPredicted RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 NDUFV2P19404 249 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 NNTQ13423 1086 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 PRR16Q569H4 304 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 GJC2Q5T442 439 aaPredicted RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 TTC29Q8NA56 475 aaPredicted RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 WDR48Q8TAF3 677 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 RBSNQ9H1K0 784 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 WDR41Q9HAD4 459 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 SYTL2Q9HCH5 934 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 COL1A2P08123 1366 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 AGXTP21549 392 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 TDGQ13569 410 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 GALNT15Q8N3T1 639 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 RDM1Q8NG50 284 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 SCAND2PQ9GZW5 306 aaPredicted RBP3.56□□□□□ -1.84
LPP-220ENST00000617246 NRBP1Q9UHY1 535 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 ACOT7O00154 380 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 TFCP2Q12800 502 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 P4HA3Q7Z4N8 544 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 GPR135Q8IZ08 494 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 METTL21AQ8WXB1 218 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 KLHL5Q96PQ7 755 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 MAF1Q9H063 256 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 CYLDQ9NQC7 956 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms