RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 LLGL2Q6P1M3 1020 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 SCARA5Q6ZMJ2 495 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 RUFY4Q6ZNE9 571 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 TRIM58Q8NG06 486 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 ANKRD7Q92527 254 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 AGPAT1Q99943 283 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 ZFYVE28Q9HCC9 887 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 GNEQ9Y223 722 aaKnown RBP8.39□□□□□ -1.07
NEK3-207ENST00000617054 HES2Q9Y543 173 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 NUB1Q9Y5A7 615 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 BZW2Q9Y6E2 419 aaKnown RBP8.39□□□□□ -1.07
NEK3-207ENST00000617054 ZSWIM8A7E2V4 1837 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 GRID2IPA4D2P6 1211 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 ACKR2O00590 384 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 PJA2O43164 708 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 N4BP1O75113 896 aaKnown RBP8.39□□□□□ -1.07
NEK3-207ENST00000617054 FTLP02792 175 aaPredicted RBP8.39□□□□□ -1.07
NEK3-207ENST00000617054 KRT19P08727 400 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 CHRNB2P17787 502 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 PSMC4P43686 418 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 ORC1Q13415 861 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 DSG2Q14126 1118 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 SRGAP1Q7Z6B7 1085 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 PASD1Q8IV76 773 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 EPS8L1Q8TE68 723 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 BTBD6Q96KE9 485 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 TLR10Q9BXR5 811 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 FZD8Q9H461 694 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 COQ4Q9Y3A0 265 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 TLL2Q9Y6L7 1015 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 MEFVO15553 781 aaPredicted RBP8.39□□□□□ -1.07
NEK3-207ENST00000617054 TREHO43280 583 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 SEC31AO94979 1220 aaKnown RBP8.39□□□□□ -1.07
NEK3-207ENST00000617054 PIGRP01833 764 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 H2AFZP0C0S5 128 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 C6orf222P0C671 652 aaPredicted RBP8.39□□□□□ -1.07
NEK3-207ENST00000617054 ARF4P18085 180 aaPredicted RBP8.39□□□□□ -1.07
NEK3-207ENST00000617054 MFAP3P55082 362 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 MYL6P60660 151 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 C2orf54Q08AI8 447 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 BMS1Q14692 1282 aaKnown RBP8.39□□□□□ -1.07
NEK3-207ENST00000617054 ZNF484Q5JVG2 852 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 C15orf39Q6ZRI6 1047 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 H2AFVQ71UI9 128 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 VPS36Q86VN1 386 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 CPNE8Q86YQ8 564 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 EFCAB13Q8IY85 973 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 FAM71AQ8IYT1 594 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 PDCL2Q8N4E4 241 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 TRPV1Q8NER1 839 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 SLC35G2Q8TBE7 412 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 CAGE1Q8TC20 777 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 DNAJB3Q8WWF6 145 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 OSMRQ99650 979 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 SYT11Q9BT88 431 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 CDT1Q9H211 546 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 JRKLQ9Y4A0 524 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 TRPM7Q96QT4 1865 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 EFCAB8A8MWE9 144 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 KIF3CO14782 793 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 P4HA2O15460 535 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 WEE2P0C1S8 567 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 SMIM10L2AP0DMW4 78 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 SMIM10L2BP0DMW5 78 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 CYP11B1P15538 503 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 IBSPP21815 317 aaPredicted RBP8.38□□□□□ -1.07
NEK3-207ENST00000617054 NCOA4Q13772 614 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 TFDP1Q14186 410 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 LLGL1Q15334 1064 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 PAPD7Q5XG87 772 aaKnown RBP8.38□□□□□ -1.07
NEK3-207ENST00000617054 TMEM270Q6UE05 265 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 ZPBP2Q6X784 338 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 ZNF662Q6ZS27 426 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 CPA5Q8WXQ8 436 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 EMID1Q96A84 441 aaPredicted RBP8.38□□□□□ -1.07
NEK3-207ENST00000617054 ALS2CR12Q96Q35 445 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 PTPRHQ9HD43 1115 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 SLC5A4Q9NY91 659 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 COG5Q9UP83 839 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 TMEM110-MUSTN1A8MSY1 372 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 OGTO15294 1046 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 LDHAP00338 332 aaKnown RBP8.38□□□□□ -1.07
NEK3-207ENST00000617054 ELNP15502 786 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 TMOD1P28289 359 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 FLT3LGP49771 235 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 MCL1Q07820 350 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 KIF22Q14807 665 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 AMHR2Q16671 573 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 WDR44Q5JSH3 913 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 MPZL3Q6UWV2 235 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 TSHZ1Q6ZSZ6 1077 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 USP37Q86T82 979 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 SHC3Q92529 594 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 USP6NLQ92738 828 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 OSBPL9Q96SU4 736 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 C1orf112Q9NSG2 853 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 NXF1Q9UBU9 619 aaKnown RBP8.38□□□□□ -1.07
NEK3-207ENST00000617054 KCNG1Q9UIX4 513 aa8.38□□□□□ -1.07
NEK3-207ENST00000617054 NOCTQ9UK39 431 aaKnown RBP8.38□□□□□ -1.07
NEK3-207ENST00000617054 CPSF3Q9UKF6 684 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms