RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 TXNP10599 105 aaKnown RBP16.86■□□□□ 0.29
NR1H3-235ENST00000616973 HSPA6P17066 643 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 ACO1P21399 889 aaKnown RBP16.86■□□□□ 0.29
NR1H3-235ENST00000616973 TBXAS1P24557 533 aaPredicted RBP16.86■□□□□ 0.29
NR1H3-235ENST00000616973 CYP2C19P33261 490 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 ZNF771Q7L3S4 317 aaPredicted RBP16.86■□□□□ 0.29
NR1H3-235ENST00000616973 MAATS1Q7Z4T9 603 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 ZNF564Q8TBZ8 553 aaPredicted RBP16.86■□□□□ 0.29
NR1H3-235ENST00000616973 CD101Q93033 1021 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 SLC10A4Q96EP9 437 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 ACO2Q99798 780 aaKnown RBP16.86■□□□□ 0.29
NR1H3-235ENST00000616973 ZSWIM1Q9BR11 485 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 NUP85Q9BW27 656 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 TAF1DQ9H5J8 278 aaPredicted RBP16.86■□□□□ 0.29
NR1H3-235ENST00000616973 NFU1Q9UMS0 254 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 TRPC6Q9Y210 931 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 SLC45A1Q9Y2W3 748 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 MGAMO43451 1857 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 HBP1O60381 514 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 FGGP02679 453 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 CTNNA2P26232 953 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 MARK3P27448 753 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 POU5F1Q01860 360 aaKnown RBP16.86■□□□□ 0.29
NR1H3-235ENST00000616973 CUL2Q13617 745 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 SURF1Q15526 300 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 MAPK6Q16659 721 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 TRIM50Q86XT4 487 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 WDR49Q8IV35 697 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 ALG3Q92685 438 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 TRIM11Q96F44 468 aa16.86■□□□□ 0.29
NR1H3-235ENST00000616973 DDX47Q9H0S4 455 aaKnown RBP16.86■□□□□ 0.29
NR1H3-235ENST00000616973 AVENQ9NQS1 362 aaPredicted RBP16.86■□□□□ 0.29
NR1H3-235ENST00000616973 IQCA1LA6NCM1 817 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 ABLIM1O14639 778 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 OGTO15294 1046 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 PRKCBP05771 671 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 CLTAP09496 248 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 MYBL1P10243 752 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 ITGA4P13612 1032 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 COMTP21964 271 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 GGCXP38435 758 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 PTENP60484 403 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 CCNA1P78396 465 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 MCL1Q07820 350 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 TFDP1Q14186 410 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 TRIM72Q6ZMU5 477 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 IFT81Q8WYA0 676 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 SEC14L1Q92503 715 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 ELMO3Q96BJ8 720 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 FAM84AQ96KN4 292 aa16.85■□□□□ 0.29
NR1H3-235ENST00000616973 APOBEC3GQ9HC16 384 aaKnown RBP16.85■□□□□ 0.29
NR1H3-235ENST00000616973 ESYT3A0FGR9 886 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 ASAP2O43150 1006 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 RNF40O75150 1001 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 CYP1A1P04798 512 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-235ENST00000616973 PEX5P50542 639 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 MESDQ14696 234 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 WDR78Q5VTH9 848 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 RNF149Q8NC42 400 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 SH3GL2Q99962 352 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 CNOT8Q9UFF9 292 aaKnown RBP16.84■□□□□ 0.29
NR1H3-235ENST00000616973 GOLGA6L10A0A0M3HER8 536 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 CCDC66A2RUB6 948 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 TTLL13PA6NNM8 815 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 ATMINO43313 823 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-235ENST00000616973 SRGAP2CP0DJJ0 459 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 PROZP22891 400 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 CTNNA1P35221 906 aaKnown RBP16.84■□□□□ 0.29
NR1H3-235ENST00000616973 NOP14P78316 857 aaKnown RBP16.84■□□□□ 0.29
NR1H3-235ENST00000616973 ZNF792Q3KQV3 632 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 SPOPLQ6IQ16 392 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 PPP1R2P3Q6NXS1 205 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 TSHZ1Q6ZSZ6 1077 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 ARMCX2Q7L311 632 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 PNMA8AQ86V59 439 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-235ENST00000616973 MCOLN2Q8IZK6 566 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 TSEN2Q8NCE0 465 aaKnown RBP16.84■□□□□ 0.29
NR1H3-235ENST00000616973 GPRC5AQ8NFJ5 357 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 OR5B17Q8NGF7 314 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 COPS5Q92905 334 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 FZD8Q9H461 694 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 EFCC1Q9HA90 598 aa16.84■□□□□ 0.29
NR1H3-235ENST00000616973 CPSF3Q9UKF6 684 aaKnown RBP16.84■□□□□ 0.29
NR1H3-235ENST00000616973 OPA1O60313 960 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 HSF2BPO75031 334 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 PHACTR2O75167 634 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 FAM153BP0C7A2 387 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 CENPCQ03188 943 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 LAMC2Q13753 1193 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 NCOA4Q13772 614 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 FAM153CQ494X1 144 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 EAPPQ56P03 285 aaPredicted RBP16.83■□□□□ 0.28
NR1H3-235ENST00000616973 ABRAQ8N0Z2 381 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 LRRC71Q8N4P6 559 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 UBR7Q8N806 425 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 NFKBIZQ9BYH8 718 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 PTPRHQ9HD43 1115 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 PDGFCQ9NRA1 345 aa16.83■□□□□ 0.28
NR1H3-235ENST00000616973 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.83■□□□□ 0.28
NR1H3-235ENST00000616973 FAM153AQ9UHL3 310 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms