RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 MBD1Q9UIS9 605 aaPredicted RBP11.59□□□□□ -0.55
AP003900.1-202ENST00000616952 FCF1Q9Y324 198 aaKnown RBP11.59□□□□□ -0.55
AP003900.1-202ENST00000616952 C2CD3Q4AC94 2353 aa11.59□□□□□ -0.55
AP003900.1-202ENST00000616952 POMCP01189 267 aa11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 PON2Q15165 354 aa11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 USP41Q3LFD5 358 aa11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 BRICD5Q6PL45 260 aa11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 TOGARAM2Q6ZUX3 1019 aa11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 C11orf74Q86VG3 221 aa11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 RALGPS2Q86X27 583 aaPredicted RBP11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 SCLT1Q96NL6 688 aa11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 ARID3AQ99856 593 aa11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 LRRCC1Q9C099 1032 aa11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 POLMQ9NP87 494 aaPredicted RBP11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 KANSL3Q9P2N6 904 aa11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 APOBEC2Q9Y235 224 aaKnown RBP11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 MUC22E2RYF6 1773 aaPredicted RBP11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 NCANO14594 1321 aa11.58□□□□□ -0.56
AP003900.1-202ENST00000616952 NUP205Q92621 2012 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 NOTCH4Q99466 2003 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 TRABD2BA6NFA1 517 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 ZNF623O75123 536 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 ATG13O75143 517 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 ATXN3P54252 364 aaPredicted RBP11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 TRAF1Q13077 416 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 MAPK6Q16659 721 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 PRSS55Q6UWB4 352 aaPredicted RBP11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 DGKHQ86XP1 1220 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 HOMER1Q86YM7 354 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 COLGALT2Q8IYK4 626 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 SMARCD2Q92925 531 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 PGBD4Q96DM1 585 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 CAMK1GQ96NX5 476 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 ZKSCAN3Q9BRR0 538 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 SEMA4CQ9C0C4 833 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 KAT14Q9H8E8 782 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 RSAD1Q9HA92 442 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 AVENQ9NQS1 362 aaPredicted RBP11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 PIN4Q9Y237 131 aaKnown RBP11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 KIF26AQ9ULI4 1882 aaPredicted RBP11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 SALL3Q9BXA9 1300 aa11.57□□□□□ -0.56
AP003900.1-202ENST00000616952 DOPEY2Q9Y3R5 2298 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 FAM187AA6NFU0 413 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 OPHN1O60890 802 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 CSDE1O75534 798 aaKnown RBP11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 C6P13671 934 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 CD59P13987 128 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 VIPR2P41587 438 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 DHPSP49366 369 aaPredicted RBP11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 GPC3P51654 580 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 MSS51Q4VC12 460 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 AXDND1Q5T1B0 1012 aaPredicted RBP11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 FUT10Q6P4F1 479 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 LRRC69Q6ZNQ3 347 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 TMPRSS7Q7RTY8 843 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 FMNL3Q8IVF7 1028 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 GTPBP2Q9BX10 602 aaKnown RBP11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 GPR62Q9BZJ7 368 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 POLR3BQ9NW08 1133 aaPredicted RBP11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 IL17BQ9UHF5 180 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 CNTNAP2Q9UHC6 1331 aa11.56□□□□□ -0.56
AP003900.1-202ENST00000616952 IGKV6D-21A0A0A0MT36 114 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 WDR27A2RRH5 827 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 BACH1O14867 736 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 CD46P15529 392 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 EIF2S3P41091 472 aaKnown RBP11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 IL12RB1P42701 662 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 RTP2Q5QGT7 225 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 FAM160B1Q5W0V3 765 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 MFSD6LQ8IWD5 586 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 TRMT2AQ8IZ69 625 aaKnown RBP11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 STAG2Q8N3U4 1231 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 LINC01465Q8N7H1 131 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 SMARCC2Q8TAQ2 1214 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 WBP1Q96G27 269 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 CLSTN3Q9BQT9 956 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 INVSQ9Y283 1065 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 PAXBP1Q9Y5B6 917 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 PCDHB9Q9Y5E1 797 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 UBIAD1Q9Y5Z9 338 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 FLNCQ14315 2725 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 PDCD11Q14690 1871 aaKnown RBP11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 CREBBPQ92793 2442 aa11.55□□□□□ -0.56
AP003900.1-202ENST00000616952 SH3BP5O60239 455 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 MAFO75444 373 aaPredicted RBP11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 CD2BP2O95400 341 aaKnown RBP11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 APBB3O95704 486 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 BCKDHBP21953 392 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 DSC1Q08554 894 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 UVSSAQ2YD98 709 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 PRSS36Q5K4E3 855 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 VPS53Q5VIR6 699 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 SLC23A3Q6PIS1 610 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 USP17L6PQ6QN14 398 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 PRICKLE2Q7Z3G6 844 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 MARCH9Q86YJ5 346 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 CCDC60Q8IWA6 550 aaPredicted RBP11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 YAF2Q8IY57 180 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 LRRC71Q8N4P6 559 aa11.54□□□□□ -0.56
AP003900.1-202ENST00000616952 TTC8Q8TAM2 541 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms