RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SLC4A7Q9Y6M7 1214 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 EMSYQ7Z589 1322 aa7.09□□□□□ -1.27
LMO3-235ENST00000616247 A0A1W2PPM1 405 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 MAGEA13PA6NCF6 341 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 TISP43B9A030 160 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 CCDC22O60826 627 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 TBX10O75333 385 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 LMNAP02545 664 aaKnown RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 ZSCAN5DPP0CG00 497 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 PYGBP11216 843 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 CCNB1P14635 433 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 ACADSP16219 412 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 KRT4P19013 534 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 CD58P19256 250 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 CTNNA2P26232 953 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 CCNFP41002 786 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 NEK3P51956 506 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 ARFIP2P53365 341 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 TMED1Q13445 227 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 SLC1A5Q15758 541 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 PARP6Q2NL67 630 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 P3H1Q32P28 736 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 ACSBG2Q5FVE4 666 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 WASHC2DQ5SRD0 308 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 LLGL2Q6P1M3 1020 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 CYFIP1Q7L576 1253 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 SLC7A6OSQ96CW6 309 aaPredicted RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 ZNF333Q96JL9 665 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 THTPAQ9BU02 230 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 WNT8AQ9H1J5 351 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 ARL8BQ9NVJ2 186 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 BSDC1Q9NW68 430 aaPredicted RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 PPARGC1AQ9UBK2 798 aaKnown RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 MARCOQ9UEW3 520 aaPredicted RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 SH3BP1Q9Y3L3 701 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 MYH1P12882 1939 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 LRP6O75581 1613 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 B2RBV5 119 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 H3BRJ5 948 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 USP1O94782 785 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 TJP3O95049 919 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 RRM1P23921 792 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 ADRA1DP25100 572 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 SERPINB3P29508 390 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 SLC34A1Q06495 639 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 LBRQ14739 615 aaKnown RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 FAM182AQ5T1J6 154 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 C4orf50Q6ZRC1 276 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 OTOAQ7RTW8 1153 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 NEDD1Q8NHV4 660 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 RFWD2Q8NHY2 731 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 CCDC124Q96CT7 223 aaKnown RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 HIC2Q96JB3 615 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 TRAIPQ9BWF2 469 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 CADM1Q9BY67 442 aaKnown RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 ANO3Q9BYT9 981 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 TRIM55Q9BYV6 548 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 IQCGQ9H095 443 aaKnown RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 JMJD4Q9H9V9 463 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 AAASQ9NRG9 546 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 CHCHD3Q9NX63 227 aaKnown RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 BTG4Q9NY30 223 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 PRKAG3Q9UGI9 489 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 CHMP2BQ9UQN3 213 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 TRAF3IP3Q9Y228 551 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.08□□□□□ -1.28
LMO3-235ENST00000616247 IKBKGQ9Y6K9 419 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 MYH4Q9Y623 1939 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 PNMA6FA0A0J9YX94 578 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 ANKRD33BA6NCL7 494 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 BANF1O75531 89 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 WFS1O76024 890 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 STK10O94804 968 aaKnown RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 PSMG1O95456 288 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 NTSR2O95665 410 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 ZBTB48P10074 688 aaPredicted RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 RALAP11233 206 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 BMP3P12645 472 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 AKR1B1P15121 316 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 HOXD13P35453 343 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 EPHB1P54762 984 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 MARSP56192 900 aaKnown RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 JAM2P57087 298 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 GSTO1P78417 241 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 STAT4Q14765 748 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 C1orf146Q5VVC0 180 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 MTHFD1LQ6UB35 978 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 FBXO33Q7Z6M2 555 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 SLC47A2Q86VL8 602 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 LRRC6Q86X45 466 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 ARHGEF19Q8IW93 802 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 DRAXINQ8NBI3 349 aaPredicted RBP7.08□□□□□ -1.28
LMO3-235ENST00000616247 CYP2W1Q8TAV3 490 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 WDR60Q8WVS4 1066 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 OPTNQ96CV9 577 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 CLPTM1LQ96KA5 538 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 CFAP57Q96MR6 1250 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 TMEM109Q9BVC6 243 aa7.08□□□□□ -1.28
LMO3-235ENST00000616247 R3HDM2Q9Y2K5 976 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms