RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SMIM28A0A1B0GU29 152 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 I3L4J1 428 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 RFX1P22670 979 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 TKTP29401 623 aaKnown RBP22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 CDC25AP30304 524 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 GRM5P41594 1212 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 OSTNP61366 133 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 SOX4Q06945 474 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 ZNF568Q3ZCX4 644 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 AXDND1Q5T1B0 1012 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 KRT79Q5XKE5 535 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 FGF14Q92915 247 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 RPP25Q9BUL9 199 aaKnown RBP22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 TMEM134Q9H6X4 195 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 PTPRHQ9HD43 1115 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 ARHGAP28Q9P2N2 729 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 CDH7Q9ULB5 785 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 CDY1Q9Y6F8 540 aa22.81■■□□□ 1.24
TRAPPC3-208ENST00000616074 MYH11P35749 1972 aa22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 XYLBO75191 536 aa22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 BRCC3P46736 316 aa22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 YARSP54577 528 aaKnown RBP22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 MAPK7Q13164 816 aa22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 DMP1Q13316 513 aaPredicted RBP22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 XKR4Q5GH76 650 aa22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 RINT1Q6NUQ1 792 aa22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 PARM1Q6UWI2 310 aa22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 KCNK18Q7Z418 384 aa22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 NKD2Q969F2 451 aaPredicted RBP22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 DDX27Q96GQ7 796 aaKnown RBP22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 MMTAG2Q9BU76 263 aaKnown RBP22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 CCDC94Q9BW85 323 aaPredicted RBP22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 TARS2Q9BW92 718 aaKnown RBP22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 MRPL4Q9BYD3 311 aaKnown RBP22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 KMT5AQ9NQR1 393 aa22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 ARHGEF3Q9NR81 526 aa22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 SLC2A4RGQ9NR83 387 aa22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 RIF1Q5UIP0 2472 aaKnown RBP22.8■■□□□ 1.24
TRAPPC3-208ENST00000616074 PDCD11Q14690 1871 aaKnown RBP22.79■■□□□ 1.24
TRAPPC3-208ENST00000616074 LAD1O00515 517 aa22.79■■□□□ 1.24
TRAPPC3-208ENST00000616074 ALKAL1Q6UXT8 129 aa22.79■■□□□ 1.24
TRAPPC3-208ENST00000616074 C1orf186Q6ZWK4 172 aa22.79■■□□□ 1.24
TRAPPC3-208ENST00000616074 ITFG1Q8TB96 612 aa22.79■■□□□ 1.24
TRAPPC3-208ENST00000616074 FGF13Q92913 245 aa22.79■■□□□ 1.24
TRAPPC3-208ENST00000616074 DRC1Q96MC2 740 aa22.79■■□□□ 1.24
TRAPPC3-208ENST00000616074 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.79■■□□□ 1.24
TRAPPC3-208ENST00000616074 TOPORSQ9NS56 1045 aaPredicted RBP22.79■■□□□ 1.24
TRAPPC3-208ENST00000616074 HCFC1R1Q9NWW0 138 aa22.79■■□□□ 1.24
TRAPPC3-208ENST00000616074 BACE2Q9Y5Z0 518 aa22.79■■□□□ 1.24
TRAPPC3-208ENST00000616074 COL4A3Q01955 1670 aa22.78■■□□□ 1.24
TRAPPC3-208ENST00000616074 TRAPPC3O43617 180 aa22.78■■□□□ 1.24
TRAPPC3-208ENST00000616074 POU2F2P09086 479 aa22.78■■□□□ 1.24
TRAPPC3-208ENST00000616074 PRPHP41219 470 aa22.78■■□□□ 1.24
TRAPPC3-208ENST00000616074 UVSSAQ2YD98 709 aa22.78■■□□□ 1.24
TRAPPC3-208ENST00000616074 C8orf34Q49A92 452 aa22.78■■□□□ 1.24
TRAPPC3-208ENST00000616074 PHLDB3Q6NSJ2 640 aa22.78■■□□□ 1.24
TRAPPC3-208ENST00000616074 DTHD1Q6ZMT9 781 aa22.78■■□□□ 1.24
TRAPPC3-208ENST00000616074 SNX27Q96L92 541 aa22.78■■□□□ 1.24
TRAPPC3-208ENST00000616074 ZMAT2Q96NC0 199 aaKnown RBP22.78■■□□□ 1.24
TRAPPC3-208ENST00000616074 DNMT3BQ9UBC3 853 aaKnown RBP22.78■■□□□ 1.24
TRAPPC3-208ENST00000616074 FAM186AA6NE01 2351 aa22.78■■□□□ 1.24
TRAPPC3-208ENST00000616074 PTPRZ1P23471 2315 aaPredicted RBP22.77■■□□□ 1.24
TRAPPC3-208ENST00000616074 PODXLO00592 558 aa22.77■■□□□ 1.24
TRAPPC3-208ENST00000616074 ABLIM1O14639 778 aa22.77■■□□□ 1.24
TRAPPC3-208ENST00000616074 PROZP22891 400 aa22.77■■□□□ 1.24
TRAPPC3-208ENST00000616074 GPC5P78333 572 aa22.77■■□□□ 1.24
TRAPPC3-208ENST00000616074 SPECC1Q5M775 1068 aa22.77■■□□□ 1.24
TRAPPC3-208ENST00000616074 ANKS3Q6ZW76 656 aa22.77■■□□□ 1.24
TRAPPC3-208ENST00000616074 WDR87Q6ZQQ6 2873 aa22.77■■□□□ 1.24
TRAPPC3-208ENST00000616074 MIA3Q5JRA6 1907 aa22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 SFI1A8K8P3 1242 aa22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 SLC16A4O15374 487 aa22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 DCNP07585 359 aaKnown RBP22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 MCF2P10911 925 aa22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 ZRSR1Q15695 479 aaKnown RBP22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 PABPC1LQ4VXU2 614 aaKnown RBP22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 MPZL3Q6UWV2 235 aa22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 MTSS1LQ765P7 747 aa22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 ACAP3Q96P50 834 aa22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 TCHPQ9BT92 498 aa22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 C17orf75Q9HAS0 396 aa22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 SLC38A7Q9NVC3 462 aa22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 DLGAP2Q9P1A6 1054 aa22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 RBM19Q9Y4C8 960 aaKnown RBP22.76■■□□□ 1.23
TRAPPC3-208ENST00000616074 SPTBN4Q9H254 2564 aa22.75■■□□□ 1.23
TRAPPC3-208ENST00000616074 MEFVO15553 781 aaPredicted RBP22.75■■□□□ 1.23
TRAPPC3-208ENST00000616074 HARSP12081 509 aaKnown RBP22.75■■□□□ 1.23
TRAPPC3-208ENST00000616074 KCNE1P15382 129 aa22.75■■□□□ 1.23
TRAPPC3-208ENST00000616074 ROR1Q01973 937 aa22.75■■□□□ 1.23
TRAPPC3-208ENST00000616074 VARS2Q5ST30 1063 aaKnown RBP22.75■■□□□ 1.23
TRAPPC3-208ENST00000616074 NPAS3Q8IXF0 933 aa22.75■■□□□ 1.23
TRAPPC3-208ENST00000616074 ZBTB45Q96K62 511 aaPredicted RBP22.75■■□□□ 1.23
TRAPPC3-208ENST00000616074 FOXQ1Q9C009 403 aa22.75■■□□□ 1.23
TRAPPC3-208ENST00000616074 CNTN3Q9P232 1028 aa22.75■■□□□ 1.23
TRAPPC3-208ENST00000616074 SIT1Q9Y3P8 196 aa22.75■■□□□ 1.23
TRAPPC3-208ENST00000616074 GUCY2CP25092 1073 aa22.74■■□□□ 1.23
TRAPPC3-208ENST00000616074 ATP2C1P98194 919 aaPredicted RBP22.74■■□□□ 1.23
TRAPPC3-208ENST00000616074 RAD51AP2Q09MP3 1159 aa22.74■■□□□ 1.23
TRAPPC3-208ENST00000616074 MCTP1Q6DN14 999 aa22.74■■□□□ 1.23
TRAPPC3-208ENST00000616074 SLC8B1Q6J4K2 584 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms