RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 MUC3BQ9H195 1237 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 CYP3A43Q9HB55 503 aa10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 FNDC3AQ9Y2H6 1198 aaKnown RBP10.32□□□□□ -0.76
TNFRSF9-204ENST00000615230 BCL9LQ86UU0 1499 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 UMODL1Q5DID0 1318 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 CFAP69A5D8W1 941 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 CCDC85CA6NKD9 419 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 EFCAB8A8MWE9 144 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 SMAPO00193 183 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 RRP9O43818 475 aaKnown RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 RTN3O95197 1032 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 NME3Q13232 169 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 BTG3Q14201 252 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 PIGHQ14442 188 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 CRY2Q49AN0 593 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 CES5AQ6NT32 575 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZBTB18Q99592 522 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 UTP6Q9NYH9 597 aaKnown RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 DDX41Q9UJV9 622 aaKnown RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 ANAPC7Q9UJX3 599 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 CREB3O43889 395 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 PQBP1O60828 265 aaKnown RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 GPC4O75487 556 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 KLRK1P26718 216 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 EHHADHQ08426 723 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 SYT2Q8N9I0 419 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 TTC8Q8TAM2 541 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 RIN2Q8WYP3 895 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 C18orf8Q96DM3 657 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 AIFM3Q96NN9 605 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 TINF2Q9BSI4 451 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 VCX3BQ9H321 246 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 RIC1Q4ADV7 1423 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 NFASCO94856 1347 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 NRCAMQ92823 1304 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 VCLP18206 1134 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 CTCFP49711 727 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 KRT71Q3SY84 523 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZNF564Q8TBZ8 553 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 SYTL5Q8TDW5 730 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 RILPQ96NA2 401 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 P2RX7Q99572 595 aaKnown RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 REEP2Q9BRK0 252 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 RRN3Q9NYV6 651 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 TBX20Q9UMR3 447 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 DDTLA6NHG4 134 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 ARHGAP42A6NI28 874 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 TBKBP1A7MCY6 615 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 SHMT1P34896 483 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 CTXN3Q4LDR2 81 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 GLE1Q53GS7 698 aaKnown RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 DDX42Q86XP3 938 aaKnown RBP eCLIP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 RCOR2Q8IZ40 523 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 ATPAF2Q8N5M1 289 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 ACER1Q8TDN7 264 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 UPF1Q92900 1129 aaKnown RBP eCLIP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 XPO6Q96QU8 1125 aaKnown RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 FRMD8P1Q9BZ68 369 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 UVRAGQ9P2Y5 699 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 MYO5BQ9ULV0 1848 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 LTBP3Q9NS15 1303 aa10.31□□□□□ -0.76
TNFRSF9-204ENST00000615230 GRID2IPA4D2P6 1211 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 MYO1DO94832 1006 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZRANB2O95218 330 aaKnown RBP eCLIP10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 F9P00740 461 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 IL9RQ01113 521 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 FAM110CQ1W6H9 321 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 WDR72Q3MJ13 1102 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 SYTL3Q4VX76 610 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 MKL1Q969V6 931 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 RIOX1Q9H6W3 641 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 NRBP1Q9UHY1 535 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 SLC13A4Q9UKG4 626 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 CFAP99D6REC4 459 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 E5RI56 91 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 H3BRB1 525 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZNF197O14709 1029 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 IRX5P78411 483 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 CUL1Q13616 776 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 KLHL38Q2WGJ6 581 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 P3H1Q32P28 736 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 SLC45A4Q5BKX6 768 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 LRRC8AQ8IWT6 810 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 KIF2CQ99661 725 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 STK33Q9BYT3 514 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 TAF1DQ9H5J8 278 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 TUT1Q9H6E5 874 aaKnown RBP10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 VPS9D1Q9Y2B5 631 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 SLC9A3R1O14745 358 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 MSH4O15457 936 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 DYNLT1P63172 113 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 NXNQ6DKJ4 435 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 RNF10Q8N5U6 811 aaKnown RBP10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 OSCP1Q8WVF1 389 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 MCUR1Q96AQ8 359 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 HPDLQ96IR7 371 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 PDCD2LQ9BRP1 358 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 TUBB6Q9BUF5 446 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 SPATA16Q9BXB7 569 aa10.3□□□□□ -0.76
TNFRSF9-204ENST00000615230 DCLK3Q9C098 648 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms