RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 SPRED2Q7Z698 418 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 RTN4RL1Q86UN2 441 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 SMG8Q8ND04 991 aaKnown RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 SP7Q8TDD2 431 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 PARD3BQ8TEW8 1205 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 PPM1EQ8WY54 764 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 ARNTL2Q8WYA1 636 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 ZNF516Q92618 1163 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 POP1Q99575 1024 aaKnown RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 TCHPQ9BT92 498 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 IFIH1Q9BYX4 1025 aaKnown RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 RNF39Q9H2S5 420 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 PDE11AQ9HCR9 933 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 PRDM6Q9NQX0 595 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 MAGEC2Q9UBF1 373 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 ARMCX3Q9UH62 379 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 FRMD4BQ9Y2L6 1034 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 HES2Q9Y543 173 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 MTCH2Q9Y6C9 303 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 SQORQ9Y6N5 450 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 KIAA1671Q9BY89 1806 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 COL4A4P53420 1690 aaPredicted RBP8.72□□□□□ -1.01
PCDH9-205ENST00000614931 ZNF233A6NK53 670 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 KIAA0391O15091 583 aaKnown RBP8.72□□□□□ -1.01
PCDH9-205ENST00000614931 GRM5P41594 1212 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 VAMP7P51809 220 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 APBA1Q02410 837 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 KCNH2Q12809 1159 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 NR1I3Q14994 352 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 PSMD6Q15008 389 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 PCBP1Q15365 356 aaKnown RBP eCLIP8.72□□□□□ -1.01
PCDH9-205ENST00000614931 DCAF4L1Q3SXM0 396 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 CBWD6Q4V339 395 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 VWA3BQ502W6 1294 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 DCAF17Q5H9S7 520 aaPredicted RBP8.72□□□□□ -1.01
PCDH9-205ENST00000614931 CBWD3Q5JTY5 395 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 CBWD5Q5RIA9 395 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 TCERG1LQ5VWI1 586 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 DPY19L2P1Q6NXN4 242 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 EFCAB13Q8IY85 973 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 OR5B17Q8NGF7 314 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 TMC2Q8TDI7 906 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 ATXN2LQ8WWM7 1075 aaKnown RBP8.72□□□□□ -1.01
PCDH9-205ENST00000614931 TGS1Q96RS0 853 aaKnown RBP8.72□□□□□ -1.01
PCDH9-205ENST00000614931 APOL6Q9BWW8 343 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 NDST4Q9H3R1 872 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 MMRN2Q9H8L6 949 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 METTL14Q9HCE5 456 aaKnown RBP8.72□□□□□ -1.01
PCDH9-205ENST00000614931 RNF19AQ9NV58 838 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 SNTG2Q9NY99 539 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 RBAKQ9NYW8 714 aaPredicted RBP8.72□□□□□ -1.01
PCDH9-205ENST00000614931 SIK3Q9Y2K2 1263 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 IPPQ9Y573 584 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.72□□□□□ -1.01
PCDH9-205ENST00000614931 PRUNE2Q8WUY3 3088 aa8.72□□□□□ -1.01
PCDH9-205ENST00000614931 UNC80Q8N2C7 3258 aa8.71□□□□□ -1.01
PCDH9-205ENST00000614931 TTC26A0AVF1 554 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 LACTBL1A8MY62 500 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 ENPP3O14638 875 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 EPHB6O15197 1021 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 GPR182O15218 404 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 RECQL4O94761 1208 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 LDHAP00338 332 aaKnown RBP8.71□□□□□ -1.02
PCDH9-205ENST00000614931 AFPP02771 609 aaKnown RBP8.71□□□□□ -1.02
PCDH9-205ENST00000614931 NFICP08651 508 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 CLTAP09496 248 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 KRT13P13646 458 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 AKAP5P24588 427 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 CDC25BP30305 580 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 GCLMP48507 274 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 FMO5P49326 533 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 KCNMA1Q12791 1236 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 SLC10A6Q3KNW5 377 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 TWF2Q6IBS0 349 aaKnown RBP8.71□□□□□ -1.02
PCDH9-205ENST00000614931 C15orf39Q6ZRI6 1047 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 INTS8Q75QN2 995 aaKnown RBP8.71□□□□□ -1.02
PCDH9-205ENST00000614931 VSTM4Q8IW00 320 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 LPPQ93052 612 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 ELMO3Q96BJ8 720 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 CCDC127Q96BQ5 260 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 CCDC51Q96ER9 411 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 MRFAP1L1Q96HT8 127 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 PDLIM2Q96JY6 352 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 SNX27Q96L92 541 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 CGRRF1Q99675 332 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 ADAM2Q99965 735 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 ADPGKQ9BRR6 497 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 TMEM117Q9H0C3 514 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 KIAA1586Q9HCI6 787 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 FAM105AQ9NUU6 356 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 LMCD1Q9NZU5 365 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 THEGQ9P2T0 379 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 TRANK1O15050 2925 aa8.71□□□□□ -1.02
PCDH9-205ENST00000614931 TSC2P49815 1807 aa8.7□□□□□ -1.02
PCDH9-205ENST00000614931 C9IYK1 514 aa8.7□□□□□ -1.02
PCDH9-205ENST00000614931 PES1O00541 588 aaKnown RBP8.7□□□□□ -1.02
PCDH9-205ENST00000614931 CBFA2T2O43439 604 aa8.7□□□□□ -1.02
PCDH9-205ENST00000614931 UPP2O95045 317 aa8.7□□□□□ -1.02
PCDH9-205ENST00000614931 VNN1O95497 513 aa8.7□□□□□ -1.02
PCDH9-205ENST00000614931 DLATP10515 647 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms