RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 ZDHHC15Q96MV8 337 aa13.33□□□□□ -0.28
MSH6-213ENST00000614496 YIPF3Q9GZM5 350 aa13.33□□□□□ -0.28
MSH6-213ENST00000614496 PCSK1NQ9UHG2 260 aa13.33□□□□□ -0.28
MSH6-213ENST00000614496 ADAMTS7Q9UKP4 1686 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 GJB6O95452 261 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 TARSP26639 723 aaKnown RBP13.32□□□□□ -0.28
MSH6-213ENST00000614496 ITIH4Q14624 930 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 SEZ6Q53EL9 994 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 C11orf63Q6NUN7 778 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 LLGL2Q6P1M3 1020 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 HSD17B14Q9BPX1 270 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 MSTO1Q9BUK6 570 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 VAV3Q9UKW4 847 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 GJA3Q9Y6H8 435 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 COL18A1P39060 1754 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 H7C0C1 242 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 MT-ND3P03897 115 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 INHBAP08476 426 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 ATP5OP48047 213 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 IRX4P78413 519 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 CAV1Q03135 178 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 SPOPLQ6IQ16 392 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 TTC27Q6P3X3 843 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 EPS8L1Q8TE68 723 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 GMCL1Q96IK5 515 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 SERPINB12Q96P63 405 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 TBC1D22BQ9NU19 505 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 NEU2Q9Y3R4 380 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 ANKRD63C9JTQ0 380 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 NFIBO00712 420 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 CREB1P16220 341 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 CHKAP35790 457 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 JAM2P57087 298 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 CNGA2Q16280 664 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 CASC4Q6P4E1 433 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 EEPD1Q7L9B9 569 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 GPD1LQ8N335 351 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 NPHS2Q9NP85 383 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 FAM198AQ9UFP1 575 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 TMEM59LQ9UK28 342 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 CFAP69A5D8W1 941 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 FAM47DPA6NHR8 397 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 I3L4J1 428 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 ASAP2O43150 1006 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 TJP3O95049 919 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 TTC4O95801 387 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 TMEM191BP0C7N4 346 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 STAT4Q14765 748 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 EXOC3L1Q86VI1 746 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 FAM81BQ96LP2 452 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 NUDCD1Q96RS6 583 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 PCDHB18PQ96TA0 734 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 TMEM39BQ9GZU3 492 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.32□□□□□ -0.28
MSH6-213ENST00000614496 KCND2Q9NZV8 630 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 ZFP69BQ9UJL9 534 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 PNMA3Q9UL41 463 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 TRIM33Q9UPN9 1127 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 NAALADL1Q9UQQ1 740 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 MAD1L1Q9Y6D9 718 aa13.32□□□□□ -0.28
MSH6-213ENST00000614496 TIAM2Q8IVF5 1701 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 VCAM1P19320 739 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 NOP14P78316 857 aaKnown RBP13.31□□□□□ -0.28
MSH6-213ENST00000614496 HADHQ16836 314 aaKnown RBP13.31□□□□□ -0.28
MSH6-213ENST00000614496 DCAF12L1Q5VU92 463 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 BTNL9Q6UXG8 535 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 CFAP61Q8NHU2 1237 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 TMEM8AQ9HCN3 771 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 HAO1Q9UJM8 370 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 FEM1BQ9UK73 627 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 NCANO14594 1321 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 UBE4BO95155 1302 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 FRMPD4Q14CM0 1322 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 PSMD10O75832 226 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 GZMAP12544 262 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 ALDH5A1P51649 535 aaPredicted RBP13.31□□□□□ -0.28
MSH6-213ENST00000614496 KIF22Q14807 665 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 SV2AQ7L0J3 742 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 PDCD7Q8N8D1 485 aaKnown RBP13.31□□□□□ -0.28
MSH6-213ENST00000614496 ZSWIM2Q8NEG5 633 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 SLC7A3Q8WY07 619 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 MAML1Q92585 1016 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 CNKSR1Q969H4 720 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 TAAR1Q96RJ0 339 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 RIT2Q99578 217 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 GINS2Q9Y248 185 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 ASNSP08243 561 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 RARRES1P49788 294 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 OVGP1Q12889 678 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 C15orf52Q6ZUT6 534 aaKnown RBP13.31□□□□□ -0.28
MSH6-213ENST00000614496 SLFN11Q7Z7L1 901 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 SPIRE2Q8WWL2 714 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 JDP2Q8WYK2 163 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 HSPH1Q92598 858 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 TMEM143Q96AN5 459 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 POLR3FQ9H1D9 316 aaPredicted RBP13.31□□□□□ -0.28
MSH6-213ENST00000614496 TBX20Q9UMR3 447 aa13.31□□□□□ -0.28
MSH6-213ENST00000614496 CIB2O75838 187 aa13.3□□□□□ -0.28
MSH6-213ENST00000614496 PIAS1O75925 651 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms