RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 CYP26B1Q9NR63 512 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 CYP39A1Q9NYL5 469 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 SLC9A2Q9UBY0 812 aa18.43■□□□□ 0.54
NEK3-206ENST00000611833 DDX20Q9UHI6 824 aaKnown RBP18.43■□□□□ 0.54
NEK3-206ENST00000611833 H0YHG0 523 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 ZC3H11AO75152 810 aaKnown RBP eCLIP18.42■□□□□ 0.545e-6■■□□□ 12.3
NEK3-206ENST00000611833 SCP2P22307 547 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 RTP1P59025 263 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 ACTR2P61160 394 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 SGO2Q562F6 1265 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 WDR44Q5JSH3 913 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 C6orf118Q5T5N4 469 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 CROCCP2Q86T23 111 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 ART4Q93070 314 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 FAM81BQ96LP2 452 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 SELENOSQ9BQE4 189 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 AZI2Q9H6S1 392 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 ATP6V0A4Q9HBG4 840 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 A1CFQ9NQ94 594 aaKnown RBP18.42■□□□□ 0.54
NEK3-206ENST00000611833 PICK1Q9NRD5 415 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 ARHGAP28Q9P2N2 729 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 GJA3Q9Y6H8 435 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 NFASCO94856 1347 aa18.42■□□□□ 0.54
NEK3-206ENST00000611833 LIG4P49917 911 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 ADCY2Q08462 1091 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 ABHD15Q6UXT9 468 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 CPLX4Q7Z7G2 160 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 CCDC25Q86WR0 208 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 C12orf50Q8NA57 414 aaPredicted RBP18.41■□□□□ 0.54
NEK3-206ENST00000611833 C1orf54Q8WWF1 131 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 PSPC1Q8WXF1 523 aaKnown RBP18.41■□□□□ 0.54
NEK3-206ENST00000611833 ZNF516Q92618 1163 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 C12orf42Q96LP6 360 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 FNBP1Q96RU3 617 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 POLR3FQ9H1D9 316 aaPredicted RBP18.41■□□□□ 0.54
NEK3-206ENST00000611833 LRRC19Q9H756 370 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 RARGP13631 454 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 TNNI1P19237 187 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 QPCTQ16769 361 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 LMBRD2Q68DH5 695 aaPredicted RBP18.41■□□□□ 0.54
NEK3-206ENST00000611833 CPA5Q8WXQ8 436 aa18.41■□□□□ 0.54
NEK3-206ENST00000611833 H0YCG3 227 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 UNGP13051 313 aaPredicted RBP18.4■□□□□ 0.54
NEK3-206ENST00000611833 SNX1Q13596 522 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 MTERF2Q49AM1 385 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 C15orf39Q6ZRI6 1047 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 ARMC9Q7Z3E5 817 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 PHLDB2Q86SQ0 1253 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 MCOLN2Q8IZK6 566 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 KAT2BQ92831 832 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 CABS1Q96KC9 395 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 EFCC1Q9HA90 598 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 PCDHB2Q9Y5E7 798 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 BRCA1P38398 1863 aaKnown RBP18.4■□□□□ 0.54
NEK3-206ENST00000611833 FSCN2O14926 492 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 RIPK2O43353 540 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 EXTL3O43909 919 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 ENPEPQ07075 957 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 CCDC121Q6ZUS5 278 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 CENPTQ96BT3 561 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 SEC16BQ96JE7 1060 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 CDHR1Q96JP9 859 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 XPO6Q96QU8 1125 aaKnown RBP18.4■□□□□ 0.54
NEK3-206ENST00000611833 TEX13BQ9BXU2 312 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 KIAA1586Q9HCI6 787 aa18.4■□□□□ 0.54
NEK3-206ENST00000611833 SPATA31C2B4DYI2 1134 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 FSBPO95073 299 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 CHN1P15882 459 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 RRM1P23921 792 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 NSFP46459 744 aaKnown RBP18.39■□□□□ 0.53
NEK3-206ENST00000611833 SLCO1A2P46721 670 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 WNT7BP56706 349 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 BPIFB4P59827 614 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 IFI35P80217 286 aaPredicted RBP18.39■□□□□ 0.53
NEK3-206ENST00000611833 SP2Q02086 613 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 KRT17Q04695 432 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 MKRN4PQ13434 485 aaPredicted RBP18.39■□□□□ 0.53
NEK3-206ENST00000611833 UBAP2Q5T6F2 1119 aaKnown RBP18.39■□□□□ 0.53
NEK3-206ENST00000611833 ERMARDQ5T6L9 678 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 FBXW10Q5XX13 1052 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 C6orf89Q6UWU4 347 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 CACNA2D3Q8IZS8 1091 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 ZNF526Q8TF50 670 aaPredicted RBP18.39■□□□□ 0.53
NEK3-206ENST00000611833 TRIM11Q96F44 468 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 FAM129AQ9BZQ8 928 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 ACAD9Q9H845 621 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.39■□□□□ 0.53
NEK3-206ENST00000611833 AGTP01019 485 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 MYBL1P10243 752 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 PIK3CAP42336 1068 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 BAG6P46379 1132 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 STRN3Q13033 797 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 GKAP1Q5VSY0 366 aaPredicted RBP18.39■□□□□ 0.53
NEK3-206ENST00000611833 MIS18BP1Q6P0N0 1132 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 ZNF677Q86XU0 584 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 EPS8L3Q8TE67 593 aaKnown RBP18.39■□□□□ 0.53
NEK3-206ENST00000611833 MAIP1Q8WWC4 291 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 CHMP6Q96FZ7 201 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 TRIM7Q9C029 511 aa18.39■□□□□ 0.53
NEK3-206ENST00000611833 STMN4Q9H169 189 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms