RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 CUL1Q13616 776 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 PLCB4Q15147 1175 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 TRADDQ15628 312 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 FAM153CQ494X1 144 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 SHCBP1Q8NEM2 672 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 ZSWIM1Q9BR11 485 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 FAM153AQ9UHL3 310 aa30.08■■■□□ 2.41
CSPG5-205ENST00000610462 LDLRAD1Q5T700 205 aa30.07■■■□□ 2.4
CSPG5-205ENST00000610462 SPOPLQ6IQ16 392 aa30.07■■■□□ 2.4
CSPG5-205ENST00000610462 MAATS1Q7Z4T9 603 aa30.07■■■□□ 2.4
CSPG5-205ENST00000610462 MREGQ8N565 214 aa30.07■■■□□ 2.4
CSPG5-205ENST00000610462 RIN2Q8WYP3 895 aaPredicted RBP30.07■■■□□ 2.4
CSPG5-205ENST00000610462 WNT8AQ9H1J5 351 aa30.07■■■□□ 2.4
CSPG5-205ENST00000610462 SNAPC2Q13487 334 aa30.07■■■□□ 2.4
CSPG5-205ENST00000610462 TTLL13PA6NNM8 815 aa30.06■■■□□ 2.4
CSPG5-205ENST00000610462 HARSP12081 509 aaKnown RBP30.06■■■□□ 2.4
CSPG5-205ENST00000610462 ZNF211Q13398 564 aaPredicted RBP30.06■■■□□ 2.4
CSPG5-205ENST00000610462 CUL2Q13617 745 aa30.06■■■□□ 2.4
CSPG5-205ENST00000610462 PPP2R5EQ16537 467 aa30.06■■■□□ 2.4
CSPG5-205ENST00000610462 BRSK2Q8IWQ3 736 aa30.06■■■□□ 2.4
CSPG5-205ENST00000610462 ZBTB8OSQ8IWT0 167 aa30.06■■■□□ 2.4
CSPG5-205ENST00000610462 APOBEC3GQ9HC16 384 aaKnown RBP30.06■■■□□ 2.4
CSPG5-205ENST00000610462 AMACRQ9UHK6 382 aa30.06■■■□□ 2.4
CSPG5-205ENST00000610462 HSF2BPO75031 334 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 TOM1L1O75674 476 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 CALCAP01258 141 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 UNGP13051 313 aaPredicted RBP30.05■■■□□ 2.4
CSPG5-205ENST00000610462 ACO1P21399 889 aaKnown RBP30.05■■■□□ 2.4
CSPG5-205ENST00000610462 KRT35Q92764 455 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 CD101Q93033 1021 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 JPH2Q9BR39 696 aaPredicted RBP30.05■■■□□ 2.4
CSPG5-205ENST00000610462 SRGAP2CP0DJJ0 459 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 TXNP10599 105 aaKnown RBP30.05■■■□□ 2.4
CSPG5-205ENST00000610462 SLC26A2P50443 739 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 SEZ6Q53EL9 994 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 LRRC71Q8N4P6 559 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 OR5B17Q8NGF7 314 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 COPS5Q92905 334 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 ACO2Q99798 780 aaKnown RBP30.05■■■□□ 2.4
CSPG5-205ENST00000610462 C2orf40Q9H1Z8 148 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 SMARCAD1Q9H4L7 1026 aa30.05■■■□□ 2.4
CSPG5-205ENST00000610462 CNOT8Q9UFF9 292 aaKnown RBP30.05■■■□□ 2.4
CSPG5-205ENST00000610462 PEX5P50542 639 aa30.04■■■□□ 2.4
CSPG5-205ENST00000610462 AP3M2P53677 418 aa30.04■■■□□ 2.4
CSPG5-205ENST00000610462 PTENP60484 403 aa30.04■■■□□ 2.4
CSPG5-205ENST00000610462 POU5F1Q01860 360 aaKnown RBP30.04■■■□□ 2.4
CSPG5-205ENST00000610462 GRM1Q13255 1194 aa30.04■■■□□ 2.4
CSPG5-205ENST00000610462 RNF149Q8NC42 400 aa30.04■■■□□ 2.4
CSPG5-205ENST00000610462 SH3GL2Q99962 352 aa30.04■■■□□ 2.4
CSPG5-205ENST00000610462 FAM204AQ9H8W3 233 aa30.04■■■□□ 2.4
CSPG5-205ENST00000610462 NR2E1Q9Y466 385 aa30.04■■■□□ 2.4
CSPG5-205ENST00000610462 GOLGA6L10A0A0M3HER8 536 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 ASB14A6NK59 587 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 FAM189A1O60320 539 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 PRKCBP05771 671 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 CLTAP09496 248 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 TTLL4Q14679 1199 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 NAA35Q5VZE5 725 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 PLXNA1Q9UIW2 1896 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 TBXAS1P24557 533 aaPredicted RBP30.03■■■□□ 2.4
CSPG5-205ENST00000610462 CTNNA2P26232 953 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 MARCKSL1P49006 195 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 GUCY2FP51841 1108 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 MAPK6Q16659 721 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 ZBTB33Q86T24 672 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 GTF3C2Q8WUA4 911 aaPredicted RBP30.03■■■□□ 2.4
CSPG5-205ENST00000610462 BTBD6Q96KE9 485 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 TCHPQ9BT92 498 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 PNMA3Q9UL41 463 aa30.03■■■□□ 2.4
CSPG5-205ENST00000610462 SCN4AP35499 1836 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 OPA1O60313 960 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 ECHS1P30084 290 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 TNFSF9P41273 254 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 HLTFQ14527 1009 aaKnown RBP eCLIP30.02■■■□□ 2.4
CSPG5-205ENST00000610462 EAPPQ56P03 285 aaPredicted RBP30.02■■■□□ 2.4
CSPG5-205ENST00000610462 PDGFCQ9NRA1 345 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 TTI1O43156 1089 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 HSPA6P17066 643 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 NOP14P78316 857 aaKnown RBP30.02■■■□□ 2.4
CSPG5-205ENST00000610462 NCOA4Q13772 614 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 WDR49Q8IV35 697 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 MCOLN2Q8IZK6 566 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 SEC14L1Q92503 715 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 SLC10A4Q96EP9 437 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 EFCC1Q9HA90 598 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 AVENQ9NQS1 362 aaPredicted RBP30.02■■■□□ 2.4
CSPG5-205ENST00000610462 CNTN6Q9UQ52 1028 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 PCDHB4Q9Y5E5 795 aa30.02■■■□□ 2.4
CSPG5-205ENST00000610462 CCDC66A2RUB6 948 aa30.01■■■□□ 2.39
CSPG5-205ENST00000610462 OGTO15294 1046 aa30.01■■■□□ 2.39
CSPG5-205ENST00000610462 HBP1O60381 514 aa30.01■■■□□ 2.39
CSPG5-205ENST00000610462 CYP1A1P04798 512 aaPredicted RBP30.01■■■□□ 2.39
CSPG5-205ENST00000610462 CTNNA1P35221 906 aaKnown RBP30.01■■■□□ 2.39
CSPG5-205ENST00000610462 TMEM63BQ5T3F8 832 aa30.01■■■□□ 2.39
CSPG5-205ENST00000610462 GOLGA6L1Q8N7Z2 621 aa30.01■■■□□ 2.39
CSPG5-205ENST00000610462 TRIM11Q96F44 468 aa30.01■■■□□ 2.39
CSPG5-205ENST00000610462 RUFY1Q96T51 708 aa30.01■■■□□ 2.39
CSPG5-205ENST00000610462 NUB1Q9Y5A7 615 aa30.01■■■□□ 2.39
CSPG5-205ENST00000610462 PCDHA3Q9Y5H8 950 aa30.01■■■□□ 2.39
CSPG5-205ENST00000610462 SPOPO43791 374 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms