RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 DDX42Q86XP3 938 aaKnown RBP eCLIP15.07■□□□□ 0
PCDHB16-201ENST00000609684 JAMLQ86YT9 394 aa15.07■□□□□ 0
PCDHB16-201ENST00000609684 FBXL16Q8N461 479 aa15.07■□□□□ 0
PCDHB16-201ENST00000609684 TNIP3Q96KP6 325 aa15.07■□□□□ 0
PCDHB16-201ENST00000609684 TPX2Q9ULW0 747 aaKnown RBP15.07■□□□□ 0
PCDHB16-201ENST00000609684 A0A087X0T9 212 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 FAM228BP0C875 321 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 KRT10P13645 584 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 RFC5P40937 340 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 SYDE1Q6ZW31 735 aaPredicted RBP15.06■□□□□ 0
PCDHB16-201ENST00000609684 C9orf72Q96LT7 481 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 ZDHHC15Q96MV8 337 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 RBM15Q96T37 977 aaKnown RBP eCLIP15.06■□□□□ 0
PCDHB16-201ENST00000609684 RFC1P35251 1148 aaPredicted RBP15.06■□□□□ 0
PCDHB16-201ENST00000609684 MDH1P40925 334 aaKnown RBP15.06■□□□□ 0
PCDHB16-201ENST00000609684 LRRC71Q8N4P6 559 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 MYCBPQ99417 103 aaPredicted RBP15.06■□□□□ 0
PCDHB16-201ENST00000609684 TARS2Q9BW92 718 aaKnown RBP15.06■□□□□ 0
PCDHB16-201ENST00000609684 ADAM33Q9BZ11 813 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 CELF4Q9BZC1 486 aaKnown RBP15.06■□□□□ 0
PCDHB16-201ENST00000609684 L2HGDHQ9H9P8 463 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 EHD2Q9NZN4 543 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 WDR35Q9P2L0 1181 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.06■□□□□ 0
PCDHB16-201ENST00000609684 MST1RQ04912 1400 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 CHEK2O96017 543 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 ZFXP17010 805 aaPredicted RBP15.06■□□□□ 0
PCDHB16-201ENST00000609684 HSPA9P38646 679 aaKnown RBP15.06■□□□□ 0
PCDHB16-201ENST00000609684 ARFIP2P53365 341 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 TMTC4Q5T4D3 741 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 SYCP2LQ5T4T6 812 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 SPDYE2BA6NHP3 402 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 ATP5HO75947 161 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 ICAM1P05362 532 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 SPDYE6P0CI01 402 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 MDM2Q00987 491 aaPredicted RBP15.06■□□□□ 0
PCDHB16-201ENST00000609684 TMEM132DQ14C87 1099 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 CERKQ8TCT0 537 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 SEMA6BQ9H3T3 888 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 TNS2Q63HR2 1409 aa15.06■□□□□ 0
PCDHB16-201ENST00000609684 MROH1Q8NDA8 1641 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 ASAP2O43150 1006 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 AGTP01019 485 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 SNRPFP62306 86 aaKnown RBP15.05■□□□□ 0
PCDHB16-201ENST00000609684 PID1Q7Z2X4 250 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 NUDCD3Q8IVD9 361 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 MMGT1Q8N4V1 131 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 SCG3Q8WXD2 468 aaKnown RBP15.05■□□□□ 0
PCDHB16-201ENST00000609684 FAM118BQ9BPY3 351 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 NOP53Q9NZM5 478 aaKnown RBP15.05■□□□□ 0
PCDHB16-201ENST00000609684 GNGT2O14610 69 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 ITIH2P19823 946 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 EARS2Q5JPH6 523 aaKnown RBP15.05■□□□□ 0
PCDHB16-201ENST00000609684 ITPRIPL1Q6GPH6 555 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 XRRA1Q6P2D8 792 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 TRIM65Q6PJ69 517 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 MOXD1Q6UVY6 613 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 CCNYL1Q8N7R7 359 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 NAGPAQ9UK23 515 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 DUSP10Q9Y6W6 482 aa15.05■□□□□ 0
PCDHB16-201ENST00000609684 KCNN4O15554 427 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 EXTL3O43909 919 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 SREBF1P36956 1147 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 YWHAHQ04917 246 aaPredicted RBP15.05■□□□□ -0
PCDHB16-201ENST00000609684 CDKAL1Q5VV42 579 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 AGBL3Q8NEM8 1001 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 PDCD6IPQ8WUM4 868 aaKnown RBP15.05■□□□□ -0
PCDHB16-201ENST00000609684 OSBPL8Q9BZF1 889 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 TTC36A6NLP5 189 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 CAP2P40123 477 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 KCNJ1P48048 391 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 LONRF1Q17RB8 773 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 GRAMD1BQ3KR37 738 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 LRIG3Q6UXM1 1119 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 HAUS8Q9BT25 410 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 TRABDQ9H4I3 376 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 ETNK1Q9HBU6 452 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 GTSE1Q9NYZ3 720 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 TBX20Q9UMR3 447 aa15.05■□□□□ -0
PCDHB16-201ENST00000609684 WEE2P0C1S8 567 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 PON1P27169 355 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 TRMT10CQ7L0Y3 403 aaKnown RBP15.04■□□□□ -0
PCDHB16-201ENST00000609684 AFG1LQ8WV93 481 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 IFT43Q96FT9 208 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 NVLO15381 856 aaKnown RBP15.04■□□□□ -0
PCDHB16-201ENST00000609684 TRPA1O75762 1119 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 TYK2P29597 1187 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 CASP4P49662 377 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 ATF7IP2Q5U623 682 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 GPRC5CQ9NQ84 441 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 ABCF3Q9NUQ8 709 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 DCCP43146 1447 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 DDTLA6NHG4 134 aaPredicted RBP15.04■□□□□ -0
PCDHB16-201ENST00000609684 GOLGA8RI6L899 631 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 DYNC1LI2O43237 492 aaPredicted RBP15.04■□□□□ -0
PCDHB16-201ENST00000609684 ARP10275 920 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 SH3BGRP55822 239 aaPredicted RBP15.04■□□□□ -0
PCDHB16-201ENST00000609684 POU5F1BQ06416 359 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 PIGHQ14442 188 aaPredicted RBP15.04■□□□□ -0
PCDHB16-201ENST00000609684 KIF19Q2TAC6 998 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms