RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 CLASP2O75122 1294 aaKnown RBP18.24■□□□□ 0.51
SSBP4-213ENST00000602088 CXCL8P10145 99 aa18.24■□□□□ 0.51
SSBP4-213ENST00000602088 AFMP43652 599 aa18.24■□□□□ 0.51
SSBP4-213ENST00000602088 PUS10Q3MIT2 529 aaKnown RBP18.24■□□□□ 0.51
SSBP4-213ENST00000602088 ZBTB41Q5SVQ8 909 aa18.24■□□□□ 0.51
SSBP4-213ENST00000602088 KIAA0319Q5VV43 1072 aa18.24■□□□□ 0.51
SSBP4-213ENST00000602088 PTCRAQ6ISU1 281 aaPredicted RBP18.24■□□□□ 0.51
SSBP4-213ENST00000602088 DCLRE1AQ6PJP8 1040 aa18.24■□□□□ 0.51
SSBP4-213ENST00000602088 HPS3Q969F9 1004 aa18.24■□□□□ 0.51
SSBP4-213ENST00000602088 BLZF1Q9H2G9 400 aa18.24■□□□□ 0.51
SSBP4-213ENST00000602088 CPSF3Q9UKF6 684 aaKnown RBP18.24■□□□□ 0.51
SSBP4-213ENST00000602088 BARX2Q9UMQ3 279 aaPredicted RBP18.24■□□□□ 0.51
SSBP4-213ENST00000602088 EXOC7Q9UPT5 735 aa18.24■□□□□ 0.51
SSBP4-213ENST00000602088 GRXCR2A6NFK2 248 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 TMEM189-UBE2V1I3L0A0 370 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 C2CD2LO14523 706 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 URODP06132 367 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 ADRB2P07550 413 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 ADSSP30520 456 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 GLUD2P49448 558 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 CLCNKBP51801 687 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 NDUFA8P51970 172 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 DSG1Q02413 1049 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 EHHADHQ08426 723 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 CUL4BQ13620 913 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 CLUL1Q15846 466 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 ENOX2Q16206 610 aaKnown RBP18.23■□□□□ 0.51
SSBP4-213ENST00000602088 UPP1Q16831 310 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 USP41Q3LFD5 358 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 LLGL2Q6P1M3 1020 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 UNC13DQ70J99 1090 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 GPR65Q8IYL9 337 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 GRAMD1CQ8IYS0 662 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 TMEM87AQ8NBN3 555 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 GLIS3Q8NEA6 775 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 ADAMTS19Q8TE59 1207 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 HASPINQ8TF76 798 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 C18orf25Q96B23 403 aaPredicted RBP18.23■□□□□ 0.51
SSBP4-213ENST00000602088 DDX27Q96GQ7 796 aaKnown RBP18.23■□□□□ 0.51
SSBP4-213ENST00000602088 PAGE5Q96GU1 130 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 USP25Q9UHP3 1055 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 CD207Q9UJ71 328 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 SSX2IPQ9Y2D8 614 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 HCFC2Q9Y5Z7 792 aa18.23■□□□□ 0.51
SSBP4-213ENST00000602088 SF3B1O75533 1304 aaKnown RBP eCLIP18.23■□□□□ 0.514e-6■■■■■ 89
SSBP4-213ENST00000602088 NCOR1O75376 2440 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.22■□□□□ 0.51
SSBP4-213ENST00000602088 PVALEFA0A1B0GWK0 134 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 LACTBL1A8MY62 500 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 DLL1O00548 723 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 PRPF6O94906 941 aaKnown RBP18.22■□□□□ 0.51
SSBP4-213ENST00000602088 CNPP09543 421 aaKnown RBP18.22■□□□□ 0.51
SSBP4-213ENST00000602088 IGFBP6P24592 240 aaPredicted RBP18.22■□□□□ 0.51
SSBP4-213ENST00000602088 POSTNQ15063 836 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 ZBTB6Q15916 424 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 FAM26FQ5R3K3 315 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 KIAA1841Q6NSI8 718 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 CD300LGQ6UXG3 332 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 STXBP4Q6ZWJ1 553 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 SYCP3Q8IZU3 236 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 FSIP1Q8NA03 581 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 B3GALT6Q96L58 329 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 KLHL5Q96PQ7 755 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 EMILIN2Q9BXX0 1053 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 TMEM206Q9H813 350 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 RPF1Q9H9Y2 349 aaKnown RBP18.22■□□□□ 0.51
SSBP4-213ENST00000602088 RXFP1Q9HBX9 757 aa18.22■□□□□ 0.51
SSBP4-213ENST00000602088 AGO2Q9UKV8 859 aaKnown RBP18.22■□□□□ 0.51
SSBP4-213ENST00000602088 PDCD11Q14690 1871 aaKnown RBP18.22■□□□□ 0.51
SSBP4-213ENST00000602088 MBTPS2O43462 519 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 B3GAT3O94766 335 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 SRGAP2BP0DMP2 458 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 IL9P15248 144 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 RPL9P32969 192 aaKnown RBP18.21■□□□□ 0.51
SSBP4-213ENST00000602088 SYKP43405 635 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 ACOT2P49753 483 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 PPP2R3AQ06190 1150 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 ELAVL2Q12926 359 aaKnown RBP18.21■□□□□ 0.51
SSBP4-213ENST00000602088 EPM2AIP1Q7L775 607 aaPredicted RBP18.21■□□□□ 0.51
SSBP4-213ENST00000602088 SMRP1Q8NCR6 262 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 C3orf58Q8NDZ4 430 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 SLC22A17Q8WUG5 538 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 POMGNT1Q8WZA1 660 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 CASP10Q92851 521 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 TSPAN18Q96SJ8 248 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 GOLPH3LQ9H4A5 285 aa18.21■□□□□ 0.51
SSBP4-213ENST00000602088 PODXLO00592 558 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 EIF3DO15371 548 aaKnown RBP eCLIP18.2■□□□□ 0.5
SSBP4-213ENST00000602088 HOXB8P17481 243 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-213ENST00000602088 GARTP22102 1010 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 KLRC2P26717 231 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 HOXD13P35453 343 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 POU5F1Q01860 360 aaKnown RBP18.2■□□□□ 0.5
SSBP4-213ENST00000602088 SPAG1Q07617 926 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 SMAD4Q13485 552 aaKnown RBP18.2■□□□□ 0.5
SSBP4-213ENST00000602088 TPRNQ4KMQ1 711 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 FAM171A1Q5VUB5 890 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 ANKRD54Q6NXT1 300 aa18.2■□□□□ 0.5
SSBP4-213ENST00000602088 CRELD2Q6UXH1 353 aaPredicted RBP18.2■□□□□ 0.5
SSBP4-213ENST00000602088 PPFIBP1Q86W92 1011 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms