RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.31■□□□□ 0.52
SNRPA-210ENST00000601393 GCNT3O95395 438 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 ASIC1P78348 528 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 DSG1Q02413 1049 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 CUL4BQ13620 913 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 ENOX2Q16206 610 aaKnown RBP18.31■□□□□ 0.52
SNRPA-210ENST00000601393 KYAT1Q16773 422 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 UPP1Q16831 310 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 UNC13DQ70J99 1090 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 GPR65Q8IYL9 337 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 GRAMD1CQ8IYS0 662 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 C3orf58Q8NDZ4 430 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 HPS3Q969F9 1004 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 UROC1Q96N76 676 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 ACCSQ96QU6 501 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 GOLPH3LQ9H4A5 285 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 PLEKHA5Q9HAU0 1116 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 GOLGA2P5Q9HBQ8 144 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 USP25Q9UHP3 1055 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 BARX2Q9UMQ3 279 aaPredicted RBP18.31■□□□□ 0.52
SNRPA-210ENST00000601393 PCDHB13Q9Y5F0 798 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 HCFC2Q9Y5Z7 792 aa18.31■□□□□ 0.52
SNRPA-210ENST00000601393 GRXCR2A6NFK2 248 aa18.3■□□□□ 0.52
SNRPA-210ENST00000601393 KLRC4O43908 158 aa18.3■□□□□ 0.52
SNRPA-210ENST00000601393 HOXD13P35453 343 aa18.3■□□□□ 0.52
SNRPA-210ENST00000601393 CLCNKBP51801 687 aa18.3■□□□□ 0.52
SNRPA-210ENST00000601393 NDUFA8P51970 172 aa18.3■□□□□ 0.52
SNRPA-210ENST00000601393 ZBTB6Q15916 424 aa18.3■□□□□ 0.52
SNRPA-210ENST00000601393 SLC22A17Q8WUG5 538 aa18.3■□□□□ 0.52
SNRPA-210ENST00000601393 PAGE5Q96GU1 130 aa18.3■□□□□ 0.52
SNRPA-210ENST00000601393 MSTO1Q9BUK6 570 aa18.3■□□□□ 0.52
SNRPA-210ENST00000601393 BLZF1Q9H2G9 400 aa18.3■□□□□ 0.52
SNRPA-210ENST00000601393 RXFP1Q9HBX9 757 aa18.3■□□□□ 0.52
SNRPA-210ENST00000601393 SLC38A7Q9NVC3 462 aa18.3■□□□□ 0.52
SNRPA-210ENST00000601393 SF3B1O75533 1304 aaKnown RBP eCLIP18.29■□□□□ 0.52
SNRPA-210ENST00000601393 DENND4AQ7Z401 1863 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 TSC2P49815 1807 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 PVALEFA0A1B0GWK0 134 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 PRPF6O94906 941 aaKnown RBP18.29■□□□□ 0.52
SNRPA-210ENST00000601393 URODP06132 367 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 CNPP09543 421 aaKnown RBP18.29■□□□□ 0.52
SNRPA-210ENST00000601393 MATR3P43243 847 aaKnown RBP eCLIP18.29■□□□□ 0.52
SNRPA-210ENST00000601393 GLUD2P49448 558 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 NDUFV1P49821 464 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 POU5F1Q01860 360 aaKnown RBP18.29■□□□□ 0.52
SNRPA-210ENST00000601393 BMS1Q14692 1282 aaKnown RBP18.29■□□□□ 0.52
SNRPA-210ENST00000601393 PUS10Q3MIT2 529 aaKnown RBP18.29■□□□□ 0.52
SNRPA-210ENST00000601393 FAM26FQ5R3K3 315 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 SLFN12LQ6IEE8 588 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 PTCRAQ6ISU1 281 aaPredicted RBP18.29■□□□□ 0.52
SNRPA-210ENST00000601393 CRELD2Q6UXH1 353 aaPredicted RBP18.29■□□□□ 0.52
SNRPA-210ENST00000601393 SMRP1Q8NCR6 262 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 ADAMTS19Q8TE59 1207 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 HASPINQ8TF76 798 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 C18orf25Q96B23 403 aaPredicted RBP18.29■□□□□ 0.52
SNRPA-210ENST00000601393 B3GALT6Q96L58 329 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 KLHL5Q96PQ7 755 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 CIZ1Q9ULV3 898 aaPredicted RBP18.29■□□□□ 0.52
SNRPA-210ENST00000601393 EXOC7Q9UPT5 735 aa18.29■□□□□ 0.52
SNRPA-210ENST00000601393 C2orf16Q68DN1 1984 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 LACTBL1A8MY62 500 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 EIF3DO15371 548 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNRPA-210ENST00000601393 MBTPS2O43462 519 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 IL9P15248 144 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 SYKP43405 635 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 AFMP43652 599 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 SMAD4Q13485 552 aaKnown RBP18.28■□□□□ 0.52
SNRPA-210ENST00000601393 USP41Q3LFD5 358 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 RTP2Q5QGT7 225 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 SYCE2Q6PIF2 218 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 DCLRE1AQ6PJP8 1040 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 EP400NLQ6ZTU2 488 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 CEP57L1Q8IYX8 460 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 FSIP1Q8NA03 581 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 ZNF507Q8TCN5 953 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 MRPL17Q9NRX2 175 aaKnown RBP18.28■□□□□ 0.52
SNRPA-210ENST00000601393 TUBGCP4Q9UGJ1 667 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 CD207Q9UJ71 328 aa18.28■□□□□ 0.52
SNRPA-210ENST00000601393 AGO2Q9UKV8 859 aaKnown RBP18.28■□□□□ 0.52
SNRPA-210ENST00000601393 SCN1AP35498 2009 aa18.27■□□□□ 0.52
SNRPA-210ENST00000601393 TADA2AO75478 443 aa18.27■□□□□ 0.52
SNRPA-210ENST00000601393 GARTP22102 1010 aa18.27■□□□□ 0.52
SNRPA-210ENST00000601393 LRPAP1P30533 357 aa18.27■□□□□ 0.52
SNRPA-210ENST00000601393 ACOT2P49753 483 aa18.27■□□□□ 0.52
SNRPA-210ENST00000601393 SMAD2Q15796 467 aaKnown RBP18.27■□□□□ 0.52
SNRPA-210ENST00000601393 ANKRD54Q6NXT1 300 aa18.27■□□□□ 0.52
SNRPA-210ENST00000601393 TMEM130Q8N3G9 435 aa18.27■□□□□ 0.52
SNRPA-210ENST00000601393 ZSWIM2Q8NEG5 633 aa18.27■□□□□ 0.52
SNRPA-210ENST00000601393 DDX27Q96GQ7 796 aaKnown RBP18.27■□□□□ 0.52
SNRPA-210ENST00000601393 TSPAN18Q96SJ8 248 aa18.27■□□□□ 0.52
SNRPA-210ENST00000601393 S1PR5Q9H228 398 aa18.27■□□□□ 0.52
SNRPA-210ENST00000601393 RPF1Q9H9Y2 349 aaKnown RBP18.27■□□□□ 0.52
SNRPA-210ENST00000601393 SSX2IPQ9Y2D8 614 aa18.27■□□□□ 0.52
SNRPA-210ENST00000601393 UBE4BO95155 1302 aa18.26■□□□□ 0.51
SNRPA-210ENST00000601393 PODXLO00592 558 aa18.26■□□□□ 0.51
SNRPA-210ENST00000601393 TEX28O15482 410 aa18.26■□□□□ 0.51
SNRPA-210ENST00000601393 B3GAT3O94766 335 aa18.26■□□□□ 0.51
SNRPA-210ENST00000601393 MYL1P05976 194 aa18.26■□□□□ 0.51
SNRPA-210ENST00000601393 EPCAMP16422 314 aa18.26■□□□□ 0.51
SNRPA-210ENST00000601393 CYP3A5P20815 502 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms