RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CTNND2Q9UQB3 1225 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 USP20Q9Y2K6 914 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 PLXNA3P51805 1871 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 SPTBN4Q9H254 2564 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 GRM6O15303 877 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 INPPL1O15357 1258 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 SLC16A3O15427 465 aaKnown RBP12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 DCXO43602 365 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 GNA14O95837 355 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 CLTAP09496 248 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 ZNF165P49910 485 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 MARSP56192 900 aaKnown RBP12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 MYL5Q02045 173 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 NHLH1Q02575 133 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 HYAL1Q12794 435 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 ADAM9Q13443 819 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 CAMK1Q14012 370 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 TMEM132AQ24JP5 1023 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 SPATA1Q5VX52 437 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 FILIP1Q7Z7B0 1213 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 HACE1Q8IYU2 909 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 GPD1LQ8N335 351 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 SMG8Q8ND04 991 aaKnown RBP12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 FAM200AQ8TCP9 573 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 YME1L1Q96TA2 773 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 MSTO1Q9BUK6 570 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 EIF2AQ9BY44 585 aaKnown RBP12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 TRIM6Q9C030 488 aaPredicted RBP12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 GZF1Q9H116 711 aaPredicted RBP12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 IKZF4Q9H2S9 585 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 PLEKHA5Q9HAU0 1116 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 UBN1Q9NPG3 1134 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 CLDND1Q9NY35 253 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 ANKFY1Q9P2R3 1169 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 CPSF3Q9UKF6 684 aaKnown RBP12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 IPPQ9Y573 584 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 PCDHB2Q9Y5E7 798 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 ANK1P16157 1881 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 VPS13AQ96RL7 3174 aa12.67□□□□□ -0.38
CHMP2A-207ENST00000600804 CACNA1HO95180 2353 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 PDCD11Q14690 1871 aaKnown RBP12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 TRIM49BA6NDI0 452 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 SMTNL1A8MU46 457 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 CLIC2O15247 247 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 LINC01565O15544 149 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 TBX10O75333 385 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 NPTXRO95502 500 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 ALADP13716 330 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 PRKCSHP14314 528 aaPredicted RBP12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 PSMC2P35998 433 aaKnown RBP12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 MRE11P49959 708 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 IQCB1Q15051 598 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 CLUL1Q15846 466 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 PTPROQ16827 1216 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 XKR4Q5GH76 650 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 CRELD2Q6UXH1 353 aaPredicted RBP12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 HFE2Q6ZVN8 426 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 ECHDC2Q86YB7 292 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 CD302Q8IX05 232 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 CSGALNACT2Q8N6G5 542 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 PGBD4Q96DM1 585 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 MFSD14AQ96MC6 490 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 CCDC94Q9BW85 323 aaPredicted RBP12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 TSPY26PQ9H489 355 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 THAP9Q9H5L6 903 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 TMEM161AQ9NX61 479 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 FRMD4BQ9Y2L6 1034 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 GIT1Q9Y2X7 761 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 MYO10Q9HD67 2058 aa12.66□□□□□ -0.38
CHMP2A-207ENST00000600804 WDR87Q6ZQQ6 2873 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 ZNF233A6NK53 670 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 C5orf67F2Z3F1 127 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 MBTPS2O43462 519 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 EXOC3O60645 756 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 STAG3L1P0CL83 205 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 ATF7P17544 494 aaPredicted RBP12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 STX17P56962 302 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 NCAPHQ15003 741 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 SNRNP35Q16560 246 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 PUS10Q3MIT2 529 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 ALKAL1Q6UXT8 129 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 EP400NLQ6ZTU2 488 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 INTS8Q75QN2 995 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 FRMD5Q7Z6J6 570 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 ZBTB33Q86T24 672 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 CDR2LQ86X02 465 aaPredicted RBP12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 NT5DC4Q86YG4 428 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 NPAS4Q8IUM7 802 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 BRSK2Q8IWQ3 736 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 ADHFE1Q8IWW8 467 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 DHX40Q8IX18 779 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 BORCS6Q96GS4 357 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 ACAP3Q96P50 834 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 PHOX2BQ99453 314 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 NXF3Q9H4D5 531 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 ASB7Q9H672 318 aa12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 METTL14Q9HCE5 456 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 TOPORSQ9NS56 1045 aaPredicted RBP12.65□□□□□ -0.38
CHMP2A-207ENST00000600804 PRKAG3Q9UGI9 489 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms