RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ZNF662Q6ZS27 426 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 GPIHBP1Q8IV16 184 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 PPM1KQ8N3J5 372 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 EVI5O60447 810 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 GRM5P41594 1212 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 ITGA7Q13683 1181 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 TMEM192Q8IY95 271 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 ASB7Q9H672 318 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 TSKSQ9UJT2 592 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 TRPV2Q9Y5S1 764 aa19.04■□□□□ 0.64
SHKBP1-224ENST00000600718 RBAK-RBAKDNI3L0D1 243 aa19.03■□□□□ 0.64
SHKBP1-224ENST00000600718 CXCL8P10145 99 aa19.03■□□□□ 0.64
SHKBP1-224ENST00000600718 GCNT1Q02742 428 aa19.03■□□□□ 0.64
SHKBP1-224ENST00000600718 PTK2Q05397 1052 aa19.03■□□□□ 0.64
SHKBP1-224ENST00000600718 TRAPPC11Q7Z392 1133 aa19.03■□□□□ 0.64
SHKBP1-224ENST00000600718 KIAA1328Q86T90 577 aa19.03■□□□□ 0.64
SHKBP1-224ENST00000600718 ARRDC4Q8NCT1 418 aa19.03■□□□□ 0.64
SHKBP1-224ENST00000600718 TMEM40Q8WWA1 233 aa19.03■□□□□ 0.64
SHKBP1-224ENST00000600718 TATDN2Q93075 761 aa19.03■□□□□ 0.64
SHKBP1-224ENST00000600718 ANKRD36BP1Q96IX9 119 aa19.03■□□□□ 0.64
SHKBP1-224ENST00000600718 ACAP3Q96P50 834 aa19.03■□□□□ 0.64
SHKBP1-224ENST00000600718 C1orf112Q9NSG2 853 aa19.03■□□□□ 0.64
SHKBP1-224ENST00000600718 LACTBL1A8MY62 500 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 ZNF263O14978 683 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 TNNC2P02585 160 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 ETF1P62495 437 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 SLC18A3Q16572 532 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 PTGISQ16647 500 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 ARHGAP29Q52LW3 1261 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 ZNF571Q7Z3V5 609 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 VPS36Q86VN1 386 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 FAM84AQ96KN4 292 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 GLT1D1Q96MS3 346 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 KREMEN1Q96MU8 473 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 PI4K2AQ9BTU6 479 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 CCDC94Q9BW85 323 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 LZTFL1Q9NQ48 299 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 PCDHA13Q9Y5I0 950 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 CDY2AQ9Y6F7 541 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 MROH7Q68CQ1 1323 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 NPTXRO95502 500 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 TMEM191BP0C7N4 346 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 PNMA6AP0CW24 399 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 TFAMQ00059 246 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 CYP27A1Q02318 531 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 NCOA4Q13772 614 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 SLC10A6Q3KNW5 377 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 CD302Q8IX05 232 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 TXLNBQ8N3L3 684 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 SHC3Q92529 594 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 MTMR12Q9C0I1 747 aa19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 LUC7LQ9NQ29 371 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.02■□□□□ 0.64
SHKBP1-224ENST00000600718 ARHGAP25P42331 645 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 VAV2P52735 878 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 GFPT1Q06210 699 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 EFCAB13Q8IY85 973 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 FAM71AQ8IYT1 594 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 KAT5Q92993 513 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 JAKMIP2Q96AA8 810 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 IFIH1Q9BYX4 1025 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 PTPN22Q9Y2R2 807 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 A0A0U1RQJ8 604 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 HSPA6P17066 643 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 MAGEA1P43355 309 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 PTK7Q13308 1070 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 ATRIPQ8WXE1 791 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 IMPG2Q9BZV3 1241 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.01■□□□□ 0.639e-6■■■■■ 32.4
SHKBP1-224ENST00000600718 PLEKHA5Q9HAU0 1116 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 ADAMTS1Q9UHI8 967 aa19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 PIN4Q9Y237 131 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-224ENST00000600718 TRIP12Q14669 1992 aaPredicted RBP19■□□□□ 0.63
SHKBP1-224ENST00000600718 A0A087X0T9 212 aa19■□□□□ 0.63
SHKBP1-224ENST00000600718 FAM228BP0C875 321 aa19■□□□□ 0.63
SHKBP1-224ENST00000600718 TRPC3Q13507 836 aa19■□□□□ 0.63
SHKBP1-224ENST00000600718 BMS1Q14692 1282 aaKnown RBP19■□□□□ 0.63
SHKBP1-224ENST00000600718 SGSM1Q2NKQ1 1148 aa19■□□□□ 0.63
SHKBP1-224ENST00000600718 C10orf76Q5T2E6 689 aa19■□□□□ 0.63
SHKBP1-224ENST00000600718 NT5DC4Q86YG4 428 aa19■□□□□ 0.63
SHKBP1-224ENST00000600718 WNT8BQ93098 351 aa19■□□□□ 0.63
SHKBP1-224ENST00000600718 TSGA10Q9BZW7 698 aa19■□□□□ 0.63
SHKBP1-224ENST00000600718 WBP1LQ9NX94 342 aa19■□□□□ 0.63
SHKBP1-224ENST00000600718 NOC2LQ9Y3T9 749 aaKnown RBP19■□□□□ 0.63
SHKBP1-224ENST00000600718 MEFVO15553 781 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 KRT86O43790 486 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 KIF5CO60282 957 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 CST3P01034 146 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 KIF5AQ12840 1032 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 FAM228AQ86W67 206 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 KIF18AQ8NI77 898 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 SH3TC2Q8TF17 1288 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 EIF2AQ9BY44 585 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 TRIM6Q9C030 488 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 SENP6Q9GZR1 1112 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 PRDM4Q9UKN5 801 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 PAXBP1Q9Y5B6 917 aa18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 ASS1P00966 412 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-224ENST00000600718 CHRNA1P02708 482 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms