RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 GLRA4Q5JXX5 417 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 RRAGBQ5VZM2 374 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 LILRA6Q6PI73 481 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 SV2BQ7L1I2 683 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 RTL10Q7L3V2 364 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 BMP8AQ7Z5Y6 402 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 HSCBQ8IWL3 235 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 CEP120Q8N960 986 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 LNX1Q8TBB1 728 aaPredicted RBP17.1■□□□□ 0.33
IRF3-226ENST00000600453 HASPINQ8TF76 798 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 EPSTI1Q96J88 318 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 ZBTB45Q96K62 511 aaPredicted RBP17.1■□□□□ 0.33
IRF3-226ENST00000600453 B3GALT6Q96L58 329 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 SNX27Q96L92 541 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 ZNF396Q96N95 335 aaPredicted RBP17.1■□□□□ 0.33
IRF3-226ENST00000600453 ZHX3Q9H4I2 956 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 CNTN3Q9P232 1028 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 ANKFY1Q9P2R3 1169 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 FBXO2Q9UK22 296 aaPredicted RBP17.1■□□□□ 0.33
IRF3-226ENST00000600453 TBX20Q9UMR3 447 aa17.1■□□□□ 0.33
IRF3-226ENST00000600453 C2CD4DB7Z1M9 353 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 WEE2P0C1S8 567 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 HARSP12081 509 aaKnown RBP17.09■□□□□ 0.33
IRF3-226ENST00000600453 RTP2Q5QGT7 225 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 KANK3Q6NY19 840 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 CCDC73Q6ZRK6 1079 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 ANKS3Q6ZW76 656 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 UBALD2Q8IYN6 164 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 KREMEN2Q8NCW0 462 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 KCNH6Q9H252 994 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 CXCL16Q9H2A7 254 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 PIDD1Q9HB75 910 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 FOXD4L1Q9NU39 408 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 CACNG4Q9UBN1 327 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 SORCS3Q9UPU3 1222 aa17.09■□□□□ 0.33
IRF3-226ENST00000600453 K7ENM7 598 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 HNRNPDLO14979 420 aaKnown RBP17.08■□□□□ 0.32
IRF3-226ENST00000600453 XPOTO43592 962 aaKnown RBP17.08■□□□□ 0.32
IRF3-226ENST00000600453 PAPLNO95428 1278 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 PIGRP01833 764 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 FGFR3P22607 806 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 SP100P23497 879 aaPredicted RBP17.08■□□□□ 0.32
IRF3-226ENST00000600453 GTF2BQ00403 316 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 UVSSAQ2YD98 709 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 SPECC1Q5M775 1068 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 SLFN12LQ6IEE8 588 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 PRSS55Q6UWB4 352 aaPredicted RBP17.08■□□□□ 0.32
IRF3-226ENST00000600453 CD302Q8IX05 232 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 SMG7Q92540 1137 aaKnown RBP17.08■□□□□ 0.32
IRF3-226ENST00000600453 CLSTN3Q9BQT9 956 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 ST6GALNAC4Q9H4F1 302 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 NUB1Q9Y5A7 615 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 BACE2Q9Y5Z0 518 aa17.08■□□□□ 0.32
IRF3-226ENST00000600453 TMEM221A6NGB7 291 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 M0R296 226 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 PODXLO00592 558 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 SYN3O14994 580 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 ZMYND10O75800 440 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 HNRNPA1P09651 372 aaKnown RBP eCLIP17.07■□□□□ 0.32
IRF3-226ENST00000600453 SPATA31D3P0C874 917 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 RPL17P18621 184 aaKnown RBP17.07■□□□□ 0.32
IRF3-226ENST00000600453 MTMR3Q13615 1198 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 RAB33AQ14088 237 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 STK38Q15208 465 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 SLC10A6Q3KNW5 377 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 LIN9Q5TKA1 542 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 FAM173BQ6P4H8 233 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 SPATA31D4Q6ZUB0 917 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 GLYCTKQ8IVS8 523 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 PBXIP1Q96AQ6 731 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 CLIC6Q96NY7 704 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 USP28Q96RU2 1077 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 LRRC27Q9C0I9 530 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 WDR6Q9NNW5 1121 aaKnown RBP17.07■□□□□ 0.32
IRF3-226ENST00000600453 SEL1LQ9UBV2 794 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 LIMD1Q9UGP4 676 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 CDH22Q9UJ99 828 aa17.07■□□□□ 0.32
IRF3-226ENST00000600453 TECTAO75443 2155 aa17.06■□□□□ 0.32
IRF3-226ENST00000600453 H7C4K7 107 aa17.06■□□□□ 0.32
IRF3-226ENST00000600453 OGTO15294 1046 aa17.06■□□□□ 0.32
IRF3-226ENST00000600453 GAP43P17677 238 aa17.06■□□□□ 0.32
IRF3-226ENST00000600453 CYP3A5P20815 502 aa17.06■□□□□ 0.32
IRF3-226ENST00000600453 NASPP49321 788 aaPredicted RBP17.06■□□□□ 0.32
IRF3-226ENST00000600453 PPP2R3AQ06190 1150 aa17.06■□□□□ 0.32
IRF3-226ENST00000600453 USP49Q70CQ1 688 aa17.06■□□□□ 0.32
IRF3-226ENST00000600453 HVCN1Q96D96 273 aa17.06■□□□□ 0.32
IRF3-226ENST00000600453 ZMAT2Q96NC0 199 aaKnown RBP17.06■□□□□ 0.32
IRF3-226ENST00000600453 RPF1Q9H9Y2 349 aaKnown RBP17.06■□□□□ 0.32
IRF3-226ENST00000600453 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.06■□□□□ 0.326e-9■■■□□ 17.9
IRF3-226ENST00000600453 MTRRQ9UBK8 725 aa17.06■□□□□ 0.32
IRF3-226ENST00000600453 SPTLC2O15270 562 aa17.05■□□□□ 0.32
IRF3-226ENST00000600453 PPP6R2O75170 966 aa17.05■□□□□ 0.32
IRF3-226ENST00000600453 RFPL2O75678 378 aa17.05■□□□□ 0.32
IRF3-226ENST00000600453 PAX3P23760 479 aa17.05■□□□□ 0.32
IRF3-226ENST00000600453 HOXA9P31269 272 aa17.05■□□□□ 0.32
IRF3-226ENST00000600453 OR1D2P34982 312 aa17.05■□□□□ 0.32
IRF3-226ENST00000600453 POU5F1Q01860 360 aaKnown RBP17.05■□□□□ 0.32
IRF3-226ENST00000600453 SOX4Q06945 474 aaPredicted RBP17.05■□□□□ 0.32
IRF3-226ENST00000600453 POSTNQ15063 836 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms