RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 ATL2Q8NHH9 583 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 SLC5A5Q92911 643 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 CEP95Q96GE4 821 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 CLPTM1LQ96KA5 538 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 BTBD10Q9BSF8 475 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 NUP85Q9BW27 656 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 ATXN10Q9UBB4 475 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 TP73O15350 636 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 PLS3P13797 630 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 SERPINB3P29508 390 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 OCRLQ01968 901 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 MTMR2Q13614 643 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 RINLQ6ZS11 566 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 DTNBP1Q96EV8 351 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 INTS2Q9H0H0 1204 aaKnown RBP17.11■□□□□ 0.33
SYDE1-204ENST00000600440 BHMT2Q9H2M3 363 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 METTL14Q9HCE5 456 aaKnown RBP17.11■□□□□ 0.33
SYDE1-204ENST00000600440 DOCK2Q92608 1830 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 STK10O94804 968 aaKnown RBP17.11■□□□□ 0.33
SYDE1-204ENST00000600440 PGM1P36871 562 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 FMO5P49326 533 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 GPC5P78333 572 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 ZNF34Q8IZ26 560 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 RBM15Q96T37 977 aaKnown RBP eCLIP17.11■□□□□ 0.333e-7■■■■□ 24.9
SYDE1-204ENST00000600440 CENPKQ9BS16 269 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 SYNCQ9H7C4 482 aa17.11■□□□□ 0.33
SYDE1-204ENST00000600440 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
SYDE1-204ENST00000600440 ASTN1O14525 1302 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 ADGRA3Q8IWK6 1321 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 ZSCAN9O15535 394 aaPredicted RBP17.1■□□□□ 0.33
SYDE1-204ENST00000600440 OR6B1O95007 311 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 GAS8O95995 478 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 TROVE2P10155 538 aaKnown RBP eCLIP17.1■□□□□ 0.33
SYDE1-204ENST00000600440 ALAS1P13196 640 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 C2CD6Q53TS8 623 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 C3orf67Q6ZVT6 689 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 NCAPG2Q86XI2 1143 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 OLIG1Q8TAK6 271 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 ZNF564Q8TBZ8 553 aaPredicted RBP17.1■□□□□ 0.33
SYDE1-204ENST00000600440 ZNF653Q96CK0 615 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 KIF13AQ9H1H9 1805 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 ADRA1DP25100 572 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 AP1B1Q10567 949 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 TMED1Q13445 227 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 P3H1Q32P28 736 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 LIN52Q52LA3 116 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 IZUMO3Q5VZ72 239 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 CCDC62Q6P9F0 684 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 KAT5Q92993 513 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 DDX27Q96GQ7 796 aaKnown RBP17.1■□□□□ 0.33
SYDE1-204ENST00000600440 LZTS2Q9BRK4 669 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 KDM3AQ9Y4C1 1321 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 TTC36A6NLP5 189 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 ITIH2P19823 946 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 MAGEA10P43363 369 aaPredicted RBP17.1■□□□□ 0.33
SYDE1-204ENST00000600440 CLUL1Q15846 466 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 MAPK6Q16659 721 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 PHLDB3Q6NSJ2 640 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 SYT2Q8N9I0 419 aaPredicted RBP17.1■□□□□ 0.33
SYDE1-204ENST00000600440 ZNF75CPQ92670 426 aaPredicted RBP17.1■□□□□ 0.33
SYDE1-204ENST00000600440 FNBP1Q96RU3 617 aa17.1■□□□□ 0.33
SYDE1-204ENST00000600440 ASCC2Q9H1I8 757 aaPredicted RBP17.1■□□□□ 0.33
SYDE1-204ENST00000600440 R3HDM2Q9Y2K5 976 aaKnown RBP17.1■□□□□ 0.33
SYDE1-204ENST00000600440 GOLGA8SH3BPF8 625 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 H3BRJ5 948 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 GOLGA8MH3BSY2 632 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 BPIFB4P59827 614 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 MYL7Q01449 175 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 DDB1Q16531 1140 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 MYCT1Q8N699 235 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 HIPK4Q8NE63 616 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 C7orf43Q8WVR3 580 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 MPP4Q96JB8 637 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 PLEKHG4BQ96PX9 1271 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 KIAA1586Q9HCI6 787 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 TYW1Q9NV66 732 aaKnown RBP17.09■□□□□ 0.33
SYDE1-204ENST00000600440 WHRNQ9P202 907 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 PLCH1Q4KWH8 1693 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 ZNF804BA4D1E1 1349 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 UBAP1LF5GYI3 381 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 CALCAP01258 141 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 SETSIPP0DME0 302 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 FASTKD3Q14CZ7 662 aaKnown RBP17.09■□□□□ 0.33
SYDE1-204ENST00000600440 SBK1Q52WX2 424 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 PRR16Q569H4 304 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 CMPK2Q5EBM0 449 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 FAM192AQ9GZU8 254 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 DDX18Q9NVP1 670 aaKnown RBP17.09■□□□□ 0.33
SYDE1-204ENST00000600440 DNM3Q9UQ16 869 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 TRAF3IP3Q9Y228 551 aa17.09■□□□□ 0.33
SYDE1-204ENST00000600440 PGM3O95394 542 aa17.08■□□□□ 0.33
SYDE1-204ENST00000600440 KRT4P19013 534 aa17.08■□□□□ 0.33
SYDE1-204ENST00000600440 ANXA13P27216 316 aa17.08■□□□□ 0.33
SYDE1-204ENST00000600440 HIBADHP31937 336 aaKnown RBP17.08■□□□□ 0.33
SYDE1-204ENST00000600440 MAGEA4P43358 317 aa17.08■□□□□ 0.33
SYDE1-204ENST00000600440 SIX1Q15475 284 aaPredicted RBP17.08■□□□□ 0.33
SYDE1-204ENST00000600440 PDK4Q16654 411 aa17.08■□□□□ 0.33
SYDE1-204ENST00000600440 TBC1D10BQ4KMP7 808 aaPredicted RBP17.08■□□□□ 0.33
SYDE1-204ENST00000600440 TRMT1LQ7Z2T5 733 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms