RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.97■□□□□ 0.15
XRCC1-208ENST00000598422 DYMQ7RTS9 669 aa15.97■□□□□ 0.15
XRCC1-208ENST00000598422 GPR149Q86SP6 731 aa15.97■□□□□ 0.15
XRCC1-208ENST00000598422 PIK3R5Q8WYR1 880 aa15.97■□□□□ 0.15
XRCC1-208ENST00000598422 KCNN1Q92952 543 aa15.97■□□□□ 0.15
XRCC1-208ENST00000598422 CNTN3Q9P232 1028 aa15.97■□□□□ 0.15
XRCC1-208ENST00000598422 PRR33A8MZF0 331 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 PODXLO00592 558 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 SPTLC2O15270 562 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 CLTAP09496 248 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 CXCL8P10145 99 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 PPP2R3AQ06190 1150 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 XKR4Q5GH76 650 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 LIN9Q5TKA1 542 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 ALKAL1Q6UXT8 129 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 C15orf39Q6ZRI6 1047 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 SPRYD3Q8NCJ5 442 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 LINC00301Q8NCQ3 95 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 CMASQ8NFW8 434 aaPredicted RBP15.96■□□□□ 0.15
XRCC1-208ENST00000598422 DDX12PQ92771 950 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 PLEKHA4Q9H4M7 779 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 C11orf16Q9NQ32 467 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 HCN4Q9Y3Q4 1203 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 NUB1Q9Y5A7 615 aa15.96■□□□□ 0.15
XRCC1-208ENST00000598422 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.96■□□□□ 0.15
XRCC1-208ENST00000598422 TGM5O43548 720 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 YEATS4O95619 227 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 C1RP00736 705 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 PIGRP01833 764 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 SPATA31D3P0C874 917 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 ZSCAN22P10073 491 aaPredicted RBP15.95■□□□□ 0.14
XRCC1-208ENST00000598422 GAP43P17677 238 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 NMT1P30419 496 aaKnown RBP15.95■□□□□ 0.14
XRCC1-208ENST00000598422 RPL9P32969 192 aaKnown RBP15.95■□□□□ 0.14
XRCC1-208ENST00000598422 FOXD4L6Q3SYB3 417 aaPredicted RBP15.95■□□□□ 0.14
XRCC1-208ENST00000598422 FOXD4L3Q6VB84 417 aaPredicted RBP15.95■□□□□ 0.14
XRCC1-208ENST00000598422 SPATA31D4Q6ZUB0 917 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 SFR1Q86XK3 245 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 MAP4K3Q8IVH8 894 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 HDAC7Q8WUI4 952 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 ACSF2Q96CM8 615 aaPredicted RBP15.95■□□□□ 0.14
XRCC1-208ENST00000598422 ZMAT2Q96NC0 199 aaKnown RBP15.95■□□□□ 0.14
XRCC1-208ENST00000598422 MSTO1Q9BUK6 570 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 MRPL44Q9H9J2 332 aaKnown RBP15.95■□□□□ 0.14
XRCC1-208ENST00000598422 PLEKHA5Q9HAU0 1116 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 PIDD1Q9HB75 910 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 TFIP11Q9UBB9 837 aaKnown RBP15.95■□□□□ 0.14
XRCC1-208ENST00000598422 SEL1LQ9UBV2 794 aa15.95■□□□□ 0.14
XRCC1-208ENST00000598422 CCDC195A0A1B0GUA6 201 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 C2CD4DB7Z1M9 353 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 I3L4J1 428 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 OGTO15294 1046 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 PPP6R2O75170 966 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 F13A1P00488 732 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 IDEP14735 1019 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 FGFR3P22607 806 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 GTF2BQ00403 316 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 SOX4Q06945 474 aaPredicted RBP15.94■□□□□ 0.14
XRCC1-208ENST00000598422 SLC10A6Q3KNW5 377 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 CYP26C1Q6V0L0 522 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 ANKS3Q6ZW76 656 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 OTOP3Q7RTS5 596 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 PDILTQ8N807 584 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 KREMEN2Q8NCW0 462 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 C3orf58Q8NDZ4 430 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 LNX1Q8TBB1 728 aaPredicted RBP15.94■□□□□ 0.14
XRCC1-208ENST00000598422 KCNG4Q8TDN1 519 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 SMG7Q92540 1137 aaKnown RBP15.94■□□□□ 0.14
XRCC1-208ENST00000598422 STAMQ92783 540 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 EDAQ92838 391 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 C18orf25Q96B23 403 aaPredicted RBP15.94■□□□□ 0.14
XRCC1-208ENST00000598422 PANK2Q9BZ23 570 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 RPF1Q9H9Y2 349 aaKnown RBP15.94■□□□□ 0.14
XRCC1-208ENST00000598422 ZDHHC7Q9NXF8 308 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 USTQ9Y2C2 406 aa15.94■□□□□ 0.14
XRCC1-208ENST00000598422 MYMKA6NI61 221 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 XPOTO43592 962 aaKnown RBP15.93■□□□□ 0.14
XRCC1-208ENST00000598422 RFPL2O75678 378 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 TKTP29401 623 aaKnown RBP15.93■□□□□ 0.14
XRCC1-208ENST00000598422 MCM4P33991 863 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 BRCC3P46736 316 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 PTPN21Q16825 1174 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 ZC2HC1CQ53FD0 456 aaPredicted RBP15.93■□□□□ 0.14
XRCC1-208ENST00000598422 SLFN12LQ6IEE8 588 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 HVCN1Q96D96 273 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 KIF12Q96FN5 646 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 FIZ1Q96SL8 496 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 HAPLN2Q9GZV7 340 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 ST6GALNAC4Q9H4F1 302 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 MTRRQ9UBK8 725 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 TUBGCP4Q9UGJ1 667 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 EXOC7Q9UPT5 735 aa15.93■□□□□ 0.14
XRCC1-208ENST00000598422 A0A087X0B3 334 aa15.92■□□□□ 0.14
XRCC1-208ENST00000598422 A0A0B4J269 797 aa15.92■□□□□ 0.14
XRCC1-208ENST00000598422 SYN3O14994 580 aa15.92■□□□□ 0.14
XRCC1-208ENST00000598422 CUTAO60888 179 aa15.92■□□□□ 0.14
XRCC1-208ENST00000598422 GCNT3O95395 438 aa15.92■□□□□ 0.14
XRCC1-208ENST00000598422 TNFSF9P41273 254 aa15.92■□□□□ 0.14
XRCC1-208ENST00000598422 ME1P48163 572 aa15.92■□□□□ 0.14
XRCC1-208ENST00000598422 ZXDAP98168 799 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms