RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ALDH7A1P49419 539 aaKnown RBP23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 WNT7BP56706 349 aa23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 FOXR2Q6PJQ5 311 aa23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 COLGALT2Q8IYK4 626 aa23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 CLP1Q92989 425 aaKnown RBP23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 C18orf25Q96B23 403 aaPredicted RBP23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 CEP63Q96MT8 703 aa23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 ZNF558Q96NG5 402 aa23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 TGS1Q96RS0 853 aaKnown RBP23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 SRRTQ9BXP5 876 aaKnown RBP23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 GZF1Q9H116 711 aaPredicted RBP23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 DNAJC25Q9H1X3 360 aa23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 UBQLN1Q9UMX0 589 aaKnown RBP23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 DERAQ9Y315 318 aa23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 RWDD3Q9Y3V2 267 aa23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 PCDHB12Q9Y5F1 795 aa23.98■■□□□ 1.43
CHMP2A-204ENST00000597848 CASTOR2A6NHX0 329 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 B4GALT3O60512 393 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 FGFR1OPO95684 399 aaKnown RBP23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 KRT13P13646 458 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 CTNNB1P35222 781 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 BMPR1AP36894 532 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 OR1G1P47890 313 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 BCAR1P56945 870 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 TFAMQ00059 246 aaKnown RBP23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 DSC1Q08554 894 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 PSMD6Q15008 389 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 KCNT2Q6UVM3 1135 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 C11orf57Q6ZUT1 292 aaPredicted RBP23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 ZC3H3Q8IXZ2 948 aaKnown RBP23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 COLGALT1Q8NBJ5 622 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 TMEM175Q9BSA9 504 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 C17orf80Q9BSJ5 609 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 MKNK1Q9BUB5 465 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 CERS4Q9HA82 394 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 FAN1Q9Y2M0 1017 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 C2CD2Q9Y426 696 aa23.97■■□□□ 1.43
CHMP2A-204ENST00000597848 MAPK13O15264 365 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 TNNI1P19237 187 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 PBX3P40426 434 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 SLC11A1P49279 550 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 NAB2Q15742 525 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 SPRED2Q7Z698 418 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 FILIP1Q7Z7B0 1213 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 BEST2Q8NFU1 509 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 CACTINQ8WUQ7 758 aaKnown RBP23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 RABGGTAQ92696 567 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 LRCH3Q96II8 777 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 SAMD11Q96NU1 681 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 MED15Q96RN5 788 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 NAT10Q9H0A0 1025 aaKnown RBP23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 GOLGA2P5Q9HBQ8 144 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 CACNG4Q9UBN1 327 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 TUBGCP4Q9UGJ1 667 aa23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 PRG3Q9Y2Y8 225 aaPredicted RBP23.96■■□□□ 1.43
CHMP2A-204ENST00000597848 NT5C1B-RDH14C9J2C7 533 aa23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 SLC16A3O15427 465 aaKnown RBP23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 GALTP07902 379 aa23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 ERVK-21P61565 698 aa23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 SOX4Q06945 474 aaPredicted RBP23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 ZBTB6Q15916 424 aa23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 CCDC40Q4G0X9 1142 aa23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 ANO6Q4KMQ2 910 aa23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 LMBRD2Q68DH5 695 aaPredicted RBP23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 INTS8Q75QN2 995 aaKnown RBP23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 USP37Q86T82 979 aa23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 NT5DC4Q86YG4 428 aa23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 EFCAB13Q8IY85 973 aa23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 ARNTL2Q8WYA1 636 aa23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 POP1Q99575 1024 aaKnown RBP23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 ZNF576Q9H609 170 aa23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.95■■□□□ 1.42
CHMP2A-204ENST00000597848 CITO14578 2027 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 GBF1Q92538 1859 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 NRP1O14786 923 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 TMEM191BP0C7N4 346 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 LINC00271P0C7V0 271 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 CYP3A5P20815 502 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 VAMP7P51809 220 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 GUCY2FP51841 1108 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 EPC2Q52LR7 807 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 SPATA1Q5VX52 437 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 CREBRFQ8IUR6 639 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 PLEKHO2Q8TD55 490 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 TMC2Q8TDI7 906 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 PARD3BQ8TEW8 1205 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 DDX27Q96GQ7 796 aaKnown RBP23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 UROC1Q96N76 676 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 CGRRF1Q99675 332 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 COLEC11Q9BWP8 271 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 DPP3Q9NY33 737 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 SPG21Q9NZD8 308 aa23.94■■□□□ 1.42
CHMP2A-204ENST00000597848 CARNS1A5YM72 827 aa23.93■■□□□ 1.42
CHMP2A-204ENST00000597848 CLCNKBP51801 687 aa23.93■■□□□ 1.42
CHMP2A-204ENST00000597848 DUOXA2Q1HG44 320 aa23.93■■□□□ 1.42
CHMP2A-204ENST00000597848 WDR49Q8IV35 697 aa23.93■■□□□ 1.42
CHMP2A-204ENST00000597848 FBXO22Q8NEZ5 403 aa23.93■■□□□ 1.42
CHMP2A-204ENST00000597848 ANKRD36BP1Q96IX9 119 aa23.93■■□□□ 1.42
CHMP2A-204ENST00000597848 FAM84AQ96KN4 292 aa23.93■■□□□ 1.42
CHMP2A-204ENST00000597848 PAAF1Q9BRP4 392 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 322.3 ms