RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 DHX34Q14147 1143 aaKnown RBP24.3■■□□□ 1.48
SRRM1-222ENST00000596378 LBX2Q6XYB7 198 aa24.3■■□□□ 1.48
SRRM1-222ENST00000596378 APOBEC3GQ9HC16 384 aaKnown RBP24.3■■□□□ 1.48
SRRM1-222ENST00000596378 ANAPC7Q9UJX3 599 aa24.3■■□□□ 1.48
SRRM1-222ENST00000596378 STYXL1Q9Y6J8 313 aa24.3■■□□□ 1.48
SRRM1-222ENST00000596378 TTLL13PA6NNM8 815 aa24.3■■□□□ 1.48
SRRM1-222ENST00000596378 HMGB1P1B2RPK0 211 aaPredicted RBP24.3■■□□□ 1.48
SRRM1-222ENST00000596378 KIAA0391O15091 583 aaKnown RBP24.3■■□□□ 1.48
SRRM1-222ENST00000596378 UNGP13051 313 aaPredicted RBP24.3■■□□□ 1.48
SRRM1-222ENST00000596378 NAMPTP43490 491 aa24.3■■□□□ 1.48
SRRM1-222ENST00000596378 CCT5P48643 541 aa24.3■■□□□ 1.48
SRRM1-222ENST00000596378 MKRN4PQ13434 485 aaPredicted RBP24.3■■□□□ 1.48
SRRM1-222ENST00000596378 PPP2R5EQ16537 467 aa24.3■■□□□ 1.48
SRRM1-222ENST00000596378 WDR44Q5JSH3 913 aa24.3■■□□□ 1.48
SRRM1-222ENST00000596378 MSTO1Q9BUK6 570 aa24.3■■□□□ 1.48
SRRM1-222ENST00000596378 SIP14410 1827 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 SOWAHBA6NEL2 793 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 FAM187AA6NFU0 413 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 ZC3H11AO75152 810 aaKnown RBP eCLIP24.29■■□□□ 1.48
SRRM1-222ENST00000596378 FARP2O94887 1054 aaPredicted RBP24.29■■□□□ 1.48
SRRM1-222ENST00000596378 CHRNA3P32297 505 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 DAB2IPQ5VWQ8 1189 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 CCDC137Q6PK04 289 aaKnown RBP24.29■■□□□ 1.48
SRRM1-222ENST00000596378 ENOSF1Q7L5Y1 443 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 NCAPG2Q86XI2 1143 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 SLC13A5Q86YT5 568 aaPredicted RBP24.29■■□□□ 1.48
SRRM1-222ENST00000596378 MORC4Q8TE76 937 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 KIAA1586Q9HCI6 787 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 BCCIPQ9P287 314 aaKnown RBP eCLIP24.29■■□□□ 1.48
SRRM1-222ENST00000596378 PTPN22Q9Y2R2 807 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 RRM1P23921 792 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 KCNJ1P48048 391 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 MTMR3Q13615 1198 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 CLUL1Q15846 466 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 ZDHHC24Q6UX98 284 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 PASD1Q8IV76 773 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 FBXO25Q8TCJ0 367 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 PPP2R3BQ9Y5P8 575 aa24.29■■□□□ 1.48
SRRM1-222ENST00000596378 UMODL1Q5DID0 1318 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 RARAP10276 462 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 CAPSQ13938 189 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 SIX1Q15475 284 aaPredicted RBP24.28■■□□□ 1.48
SRRM1-222ENST00000596378 MCOLN2Q8IZK6 566 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 OR5B17Q8NGF7 314 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 CYFIP2Q96F07 1278 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 PAGR1Q9BTK6 254 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 TXLNGYQ9BZA5 131 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 MROH7Q68CQ1 1323 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 IGKV6D-21A0A0A0MT36 114 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 CLDN3O15551 220 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 SCP2P22307 547 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 MAPK4P31152 587 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 RPL21P46778 160 aaKnown RBP24.28■■□□□ 1.48
SRRM1-222ENST00000596378 RWDD2BP57060 319 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 GADL1Q6ZQY3 521 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 NIFKQ9BYG3 293 aaKnown RBP24.28■■□□□ 1.48
SRRM1-222ENST00000596378 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.28■■□□□ 1.48
SRRM1-222ENST00000596378 GRHL1Q9NZI5 618 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 PCDHB2Q9Y5E7 798 aa24.28■■□□□ 1.48
SRRM1-222ENST00000596378 TULP2O00295 520 aa24.27■■□□□ 1.48
SRRM1-222ENST00000596378 PPFIA2O75334 1257 aa24.27■■□□□ 1.48
SRRM1-222ENST00000596378 HSPA6P17066 643 aa24.27■■□□□ 1.48
SRRM1-222ENST00000596378 ACO1P21399 889 aaKnown RBP24.27■■□□□ 1.48
SRRM1-222ENST00000596378 GPC2Q8N158 579 aa24.27■■□□□ 1.48
SRRM1-222ENST00000596378 C1orf131Q8NDD1 294 aaKnown RBP24.27■■□□□ 1.48
SRRM1-222ENST00000596378 PCYOX1Q9UHG3 505 aa24.27■■□□□ 1.48
SRRM1-222ENST00000596378 RASAL2Q9UJF2 1139 aa24.27■■□□□ 1.48
SRRM1-222ENST00000596378 ADM5C9JUS6 153 aa24.27■■□□□ 1.48
SRRM1-222ENST00000596378 MYO1CO00159 1063 aa24.27■■□□□ 1.48
SRRM1-222ENST00000596378 TRIM66O15016 1216 aa24.27■■□□□ 1.48
SRRM1-222ENST00000596378 ENPEPQ07075 957 aa24.27■■□□□ 1.48
SRRM1-222ENST00000596378 LY6KQ17RY6 165 aa24.27■■□□□ 1.48
SRRM1-222ENST00000596378 UBAP2Q5T6F2 1119 aaKnown RBP24.27■■□□□ 1.48
SRRM1-222ENST00000596378 A0A0B4J269 797 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 DCDC2CA8MYV0 355 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 PIGRP01833 764 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 MARK3P27448 753 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 TMEM270Q6UE05 265 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 CCDC105Q8IYK2 499 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 OTOFQ9HC10 1997 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 GGPS1O95749 300 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 TCF7P36402 384 aaPredicted RBP24.26■■□□□ 1.47
SRRM1-222ENST00000596378 STAT5BP51692 787 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 CUL2Q13617 745 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 RIOX2Q8IUF8 465 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 SPATC1LQ9H0A9 340 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 EPB41L4BQ9H329 900 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 PCDHB4Q9Y5E5 795 aa24.26■■□□□ 1.47
SRRM1-222ENST00000596378 LSP1P33241 339 aa24.25■■□□□ 1.47
SRRM1-222ENST00000596378 ABCD1P33897 745 aa24.25■■□□□ 1.47
SRRM1-222ENST00000596378 COILP38432 576 aaPredicted RBP24.25■■□□□ 1.47
SRRM1-222ENST00000596378 TNFSF9P41273 254 aa24.25■■□□□ 1.47
SRRM1-222ENST00000596378 TARBP2Q15633 366 aaKnown RBP24.25■■□□□ 1.47
SRRM1-222ENST00000596378 TRIM50Q86XT4 487 aa24.25■■□□□ 1.47
SRRM1-222ENST00000596378 NUB1Q9Y5A7 615 aa24.25■■□□□ 1.47
SRRM1-222ENST00000596378 ADGRA2Q96PE1 1338 aa24.25■■□□□ 1.47
SRRM1-222ENST00000596378 CNTNAP2Q9UHC6 1331 aa24.25■■□□□ 1.47
SRRM1-222ENST00000596378 SHBGP04278 402 aa24.24■■□□□ 1.47
SRRM1-222ENST00000596378 NSFP46459 744 aaKnown RBP24.24■■□□□ 1.47
SRRM1-222ENST00000596378 KRT71Q3SY84 523 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms