RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 NPHP3-ACAD11A0A0J9YXS1 232 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 SPATA31D3P0C874 917 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 GUCY2CP25092 1073 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 CREMQ03060 361 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 RAD51AP2Q09MP3 1159 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 HTR4Q13639 388 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 CDCA2Q69YH5 1023 aaPredicted RBP17.51■□□□□ 0.39
USHBP1-205ENST00000595993 ATL3Q6DD88 541 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 SHC4Q6S5L8 630 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 SPATA31D4Q6ZUB0 917 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 PALB2Q86YC2 1186 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 ADSSL1Q8N142 457 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 KIFC3Q9BVG8 833 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 SEMA4AQ9H3S1 761 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 SLC2A4RGQ9NR83 387 aa17.51■□□□□ 0.39
USHBP1-205ENST00000595993 FANCMQ8IYD8 2048 aa17.5■□□□□ 0.39
USHBP1-205ENST00000595993 CUTAO60888 179 aa17.5■□□□□ 0.39
USHBP1-205ENST00000595993 ZMYND10O75800 440 aa17.5■□□□□ 0.39
USHBP1-205ENST00000595993 AKAP5P24588 427 aa17.5■□□□□ 0.39
USHBP1-205ENST00000595993 NAMPTP43490 491 aa17.5■□□□□ 0.39
USHBP1-205ENST00000595993 CACNB1Q02641 598 aaPredicted RBP17.5■□□□□ 0.39
USHBP1-205ENST00000595993 DHX8Q14562 1220 aaKnown RBP17.5■□□□□ 0.39
USHBP1-205ENST00000595993 KCNG4Q8TDN1 519 aa17.5■□□□□ 0.39
USHBP1-205ENST00000595993 KIFAP3Q92845 792 aa17.5■□□□□ 0.39
USHBP1-205ENST00000595993 PRIMPOLQ96LW4 560 aa17.5■□□□□ 0.39
USHBP1-205ENST00000595993 APOL6Q9BWW8 343 aa17.5■□□□□ 0.39
USHBP1-205ENST00000595993 TRIM6Q9C030 488 aaPredicted RBP17.5■□□□□ 0.39
USHBP1-205ENST00000595993 RCOR1Q9UKL0 485 aa17.5■□□□□ 0.39
USHBP1-205ENST00000595993 CFAP45Q9UL16 551 aa17.5■□□□□ 0.39
USHBP1-205ENST00000595993 PCDHA7Q9UN72 937 aa17.5■□□□□ 0.39
USHBP1-205ENST00000595993 ZFP37Q9Y6Q3 630 aaPredicted RBP17.5■□□□□ 0.39
USHBP1-205ENST00000595993 NPTXRO95502 500 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 EDN1P05305 212 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 TXLNAP40222 546 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 HSP90AA2PQ14568 343 aaPredicted RBP17.49■□□□□ 0.39
USHBP1-205ENST00000595993 NAB2Q15742 525 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 FAM187BQ17R55 369 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 RTP2Q5QGT7 225 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 ERMP1Q7Z2K6 904 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 GPBP1Q86WP2 473 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 CDR2LQ86X02 465 aaPredicted RBP17.49■□□□□ 0.39
USHBP1-205ENST00000595993 GPR152Q8TDT2 470 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 RIN2Q8WYP3 895 aaPredicted RBP17.49■□□□□ 0.39
USHBP1-205ENST00000595993 LARP4BQ92615 738 aaKnown RBP17.49■□□□□ 0.39
USHBP1-205ENST00000595993 PAAF1Q9BRP4 392 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 PANK2Q9BZ23 570 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 CCDC113Q9H0I3 377 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 FZD8Q9H461 694 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 TBC1D17Q9HA65 648 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 CCDC39Q9UFE4 941 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 FBXW11Q9UKB1 542 aa17.49■□□□□ 0.39
USHBP1-205ENST00000595993 SF3B1O75533 1304 aaKnown RBP eCLIP17.48■□□□□ 0.39
USHBP1-205ENST00000595993 EP300Q09472 2414 aaPredicted RBP17.48■□□□□ 0.39
USHBP1-205ENST00000595993 TTLL13PA6NNM8 815 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 SFI1A8K8P3 1242 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 PTGESO14684 152 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 MYBP10242 640 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 RPL17P18621 184 aaKnown RBP17.48■□□□□ 0.39
USHBP1-205ENST00000595993 HOXA9P31269 272 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 ME1P48163 572 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 PEX3P56589 373 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 TUSC3Q13454 348 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 PPP2R5AQ15172 486 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 DEPTORQ8TB45 409 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 LEO1Q8WVC0 666 aaPredicted RBP17.48■□□□□ 0.39
USHBP1-205ENST00000595993 PIK3R5Q8WYR1 880 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 IFT74Q96LB3 600 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 CLSTN3Q9BQT9 956 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 REEP2Q9BRK0 252 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 TIPINQ9BVW5 301 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 PIDD1Q9HB75 910 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 ARHGEF3Q9NR81 526 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 PRMT7Q9NVM4 692 aaPredicted RBP17.48■□□□□ 0.39
USHBP1-205ENST00000595993 KLK14Q9P0G3 267 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 STK17AQ9UEE5 414 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 CA14Q9ULX7 337 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 USP20Q9Y2K6 914 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 VWA8A3KMH1 1905 aa17.48■□□□□ 0.39
USHBP1-205ENST00000595993 POU2F2P09086 479 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 HNRNPA1P09651 372 aaKnown RBP eCLIP17.47■□□□□ 0.39
USHBP1-205ENST00000595993 NPTX2P47972 431 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 KRT85P78386 507 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 RRAGBQ5VZM2 374 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 PRSS55Q6UWB4 352 aaPredicted RBP17.47■□□□□ 0.39
USHBP1-205ENST00000595993 GET4Q7L5D6 327 aaPredicted RBP17.47■□□□□ 0.39
USHBP1-205ENST00000595993 ZBTB8OSQ8IWT0 167 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 PDILTQ8N807 584 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 LNX1Q8TBB1 728 aaPredicted RBP17.47■□□□□ 0.39
USHBP1-205ENST00000595993 RABGGTAQ92696 567 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 DRC1Q96MC2 740 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 C2orf40Q9H1Z8 148 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 KCND2Q9NZV8 630 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 CACNG4Q9UBN1 327 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 NUMBLQ9Y6R0 609 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 DOCK6Q96HP0 2047 aa17.47■□□□□ 0.39
USHBP1-205ENST00000595993 OTOGLQ3ZCN5 2332 aa17.46■□□□□ 0.39
USHBP1-205ENST00000595993 TADA2AO75478 443 aa17.46■□□□□ 0.39
USHBP1-205ENST00000595993 KIF4AO95239 1232 aa17.46■□□□□ 0.39
USHBP1-205ENST00000595993 STAT6P42226 847 aa17.46■□□□□ 0.39
USHBP1-205ENST00000595993 STARD6P59095 220 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms