RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 REEP2Q9BRK0 252 aa27.78■■■□□ 2.04
ZNF558-203ENST00000595786 ZSCAN16Q9H4T2 348 aaPredicted RBP27.78■■■□□ 2.04
ZNF558-203ENST00000595786 WDR6Q9NNW5 1121 aaKnown RBP27.78■■■□□ 2.04
ZNF558-203ENST00000595786 SRPRBQ9Y5M8 271 aaKnown RBP27.78■■■□□ 2.04
ZNF558-203ENST00000595786 CLIC4Q9Y696 253 aa27.78■■■□□ 2.04
ZNF558-203ENST00000595786 CITO14578 2027 aa27.78■■■□□ 2.04
ZNF558-203ENST00000595786 RPL9P32969 192 aaKnown RBP27.77■■■□□ 2.04
ZNF558-203ENST00000595786 MTMR3Q13615 1198 aa27.77■■■□□ 2.04
ZNF558-203ENST00000595786 MCM6Q14566 821 aa27.77■■■□□ 2.04
ZNF558-203ENST00000595786 KYAT1Q16773 422 aa27.77■■■□□ 2.04
ZNF558-203ENST00000595786 LRRC15Q8TF66 581 aa27.77■■■□□ 2.04
ZNF558-203ENST00000595786 LARP4BQ92615 738 aaKnown RBP27.77■■■□□ 2.04
ZNF558-203ENST00000595786 PARVGQ9HBI0 331 aa27.77■■■□□ 2.04
ZNF558-203ENST00000595786 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.77■■■□□ 2.04
ZNF558-203ENST00000595786 ZNF318Q5VUA4 2279 aa27.76■■■□□ 2.04
ZNF558-203ENST00000595786 FAM13AO94988 1023 aa27.76■■■□□ 2.03
ZNF558-203ENST00000595786 RPL17P18621 184 aaKnown RBP27.76■■■□□ 2.03
ZNF558-203ENST00000595786 CD300LGQ6UXG3 332 aa27.76■■■□□ 2.03
ZNF558-203ENST00000595786 MYCT1Q8N699 235 aa27.76■■■□□ 2.03
ZNF558-203ENST00000595786 SMG7Q92540 1137 aaKnown RBP27.76■■■□□ 2.03
ZNF558-203ENST00000595786 ASIC4Q96FT7 647 aa27.76■■■□□ 2.03
ZNF558-203ENST00000595786 ZMAT2Q96NC0 199 aaKnown RBP27.76■■■□□ 2.03
ZNF558-203ENST00000595786 PRKD2Q9BZL6 878 aa27.76■■■□□ 2.03
ZNF558-203ENST00000595786 PLEKHA5Q9HAU0 1116 aa27.76■■■□□ 2.03
ZNF558-203ENST00000595786 CCDC39Q9UFE4 941 aa27.76■■■□□ 2.03
ZNF558-203ENST00000595786 LIMD1Q9UGP4 676 aa27.76■■■□□ 2.03
ZNF558-203ENST00000595786 C2orf16Q68DN1 1984 aa27.76■■■□□ 2.03
ZNF558-203ENST00000595786 RFPL2O75678 378 aa27.75■■■□□ 2.03
ZNF558-203ENST00000595786 ZMYND10O75800 440 aa27.75■■■□□ 2.03
ZNF558-203ENST00000595786 PIGRP01833 764 aa27.75■■■□□ 2.03
ZNF558-203ENST00000595786 SPATA31D3P0C874 917 aa27.75■■■□□ 2.03
ZNF558-203ENST00000595786 CACNB1Q02641 598 aaPredicted RBP27.75■■■□□ 2.03
ZNF558-203ENST00000595786 DHX8Q14562 1220 aaKnown RBP27.75■■■□□ 2.03
ZNF558-203ENST00000595786 SPATA31D4Q6ZUB0 917 aa27.75■■■□□ 2.03
ZNF558-203ENST00000595786 RTL10Q7L3V2 364 aa27.75■■■□□ 2.03
ZNF558-203ENST00000595786 FEZF2Q8TBJ5 459 aa27.75■■■□□ 2.03
ZNF558-203ENST00000595786 ZNF707Q96C28 371 aaPredicted RBP27.75■■■□□ 2.03
ZNF558-203ENST00000595786 ANKFY1Q9P2R3 1169 aa27.75■■■□□ 2.03
ZNF558-203ENST00000595786 STK17AQ9UEE5 414 aa27.75■■■□□ 2.03
ZNF558-203ENST00000595786 FBXO2Q9UK22 296 aaPredicted RBP27.75■■■□□ 2.03
ZNF558-203ENST00000595786 FBXW11Q9UKB1 542 aa27.75■■■□□ 2.03
ZNF558-203ENST00000595786 MTMR6Q9Y217 621 aa27.75■■■□□ 2.03
ZNF558-203ENST00000595786 BACE2Q9Y5Z0 518 aa27.75■■■□□ 2.03
ZNF558-203ENST00000595786 TRAK2O60296 914 aa27.74■■■□□ 2.03
ZNF558-203ENST00000595786 KRT18P05783 430 aaKnown RBP27.74■■■□□ 2.03
ZNF558-203ENST00000595786 CLTAP09496 248 aa27.74■■■□□ 2.03
ZNF558-203ENST00000595786 SOX4Q06945 474 aaPredicted RBP27.74■■■□□ 2.03
ZNF558-203ENST00000595786 RAB33AQ14088 237 aa27.74■■■□□ 2.03
ZNF558-203ENST00000595786 SLC10A6Q3KNW5 377 aa27.74■■■□□ 2.03
ZNF558-203ENST00000595786 ANKS3Q6ZW76 656 aa27.74■■■□□ 2.03
ZNF558-203ENST00000595786 GLYCTKQ8IVS8 523 aa27.74■■■□□ 2.03
ZNF558-203ENST00000595786 SNX21Q969T3 373 aa27.74■■■□□ 2.03
ZNF558-203ENST00000595786 MTRRQ9UBK8 725 aa27.74■■■□□ 2.03
ZNF558-203ENST00000595786 TBX20Q9UMR3 447 aa27.74■■■□□ 2.03
ZNF558-203ENST00000595786 MUC6Q6W4X9 2439 aa27.74■■■□□ 2.03
ZNF558-203ENST00000595786 VWA8A3KMH1 1905 aa27.73■■■□□ 2.03
ZNF558-203ENST00000595786 HNRNPA1P09651 372 aaKnown RBP eCLIP27.73■■■□□ 2.03
ZNF558-203ENST00000595786 HARSP12081 509 aaKnown RBP27.73■■■□□ 2.03
ZNF558-203ENST00000595786 MARCKSP29966 332 aaPredicted RBP27.73■■■□□ 2.03
ZNF558-203ENST00000595786 HOXA9P31269 272 aa27.73■■■□□ 2.03
ZNF558-203ENST00000595786 SUGP1Q8IWZ8 645 aaKnown RBP27.73■■■□□ 2.03
ZNF558-203ENST00000595786 FBXL6Q8N531 539 aa27.73■■■□□ 2.03
ZNF558-203ENST00000595786 BICD1Q96G01 975 aa27.73■■■□□ 2.03
ZNF558-203ENST00000595786 EPSTI1Q96J88 318 aa27.73■■■□□ 2.03
ZNF558-203ENST00000595786 TSPAN18Q96SJ8 248 aa27.73■■■□□ 2.03
ZNF558-203ENST00000595786 PIDD1Q9HB75 910 aa27.73■■■□□ 2.03
ZNF558-203ENST00000595786 GOLGA2P5Q9HBQ8 144 aa27.73■■■□□ 2.03
ZNF558-203ENST00000595786 CLUHO75153 1309 aa27.72■■■□□ 2.03
ZNF558-203ENST00000595786 PODXLO00592 558 aa27.72■■■□□ 2.03
ZNF558-203ENST00000595786 STX6O43752 255 aa27.72■■■□□ 2.03
ZNF558-203ENST00000595786 TBCAO75347 108 aaKnown RBP27.72■■■□□ 2.03
ZNF558-203ENST00000595786 PDIA4P13667 645 aaKnown RBP27.72■■■□□ 2.03
ZNF558-203ENST00000595786 TXLNAP40222 546 aa27.72■■■□□ 2.03
ZNF558-203ENST00000595786 UVSSAQ2YD98 709 aa27.72■■■□□ 2.03
ZNF558-203ENST00000595786 LIN9Q5TKA1 542 aa27.72■■■□□ 2.03
ZNF558-203ENST00000595786 KRI1Q8N9T8 703 aaKnown RBP27.72■■■□□ 2.03
ZNF558-203ENST00000595786 ST6GALNAC4Q9H4F1 302 aa27.72■■■□□ 2.03
ZNF558-203ENST00000595786 ZDBF2Q9HCK1 2354 aa27.72■■■□□ 2.03
ZNF558-203ENST00000595786 K7ENM7 598 aa27.71■■■□□ 2.03
ZNF558-203ENST00000595786 SYN3O14994 580 aa27.71■■■□□ 2.03
ZNF558-203ENST00000595786 MATR3P43243 847 aaKnown RBP eCLIP27.71■■■□□ 2.03
ZNF558-203ENST00000595786 LIG4P49917 911 aa27.71■■■□□ 2.03
ZNF558-203ENST00000595786 GTF2BQ00403 316 aa27.71■■■□□ 2.03
ZNF558-203ENST00000595786 SLC39A14Q15043 492 aa27.71■■■□□ 2.03
ZNF558-203ENST00000595786 USP49Q70CQ1 688 aa27.71■■■□□ 2.03
ZNF558-203ENST00000595786 C3orf58Q8NDZ4 430 aa27.71■■■□□ 2.03
ZNF558-203ENST00000595786 PRRX2Q99811 253 aa27.71■■■□□ 2.03
ZNF558-203ENST00000595786 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.71■■■□□ 2.03
ZNF558-203ENST00000595786 IGSF9Q9P2J2 1179 aa27.71■■■□□ 2.03
ZNF558-203ENST00000595786 HNRNPDLO14979 420 aaKnown RBP27.7■■■□□ 2.02
ZNF558-203ENST00000595786 MEFVO15553 781 aaPredicted RBP27.7■■■□□ 2.02
ZNF558-203ENST00000595786 POU2F2P09086 479 aa27.7■■■□□ 2.02
ZNF558-203ENST00000595786 IGFBP6P24592 240 aaPredicted RBP27.7■■■□□ 2.02
ZNF558-203ENST00000595786 OR1D2P34982 312 aa27.7■■■□□ 2.02
ZNF558-203ENST00000595786 RRAGBQ5VZM2 374 aa27.7■■■□□ 2.02
ZNF558-203ENST00000595786 FAM173BQ6P4H8 233 aa27.7■■■□□ 2.02
ZNF558-203ENST00000595786 NXPE3Q969Y0 559 aa27.7■■■□□ 2.02
ZNF558-203ENST00000595786 FIZ1Q96SL8 496 aa27.7■■■□□ 2.02
ZNF558-203ENST00000595786 HAPLN2Q9GZV7 340 aa27.7■■■□□ 2.02
ZNF558-203ENST00000595786 EPS15L1Q9UBC2 864 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms