RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 NDUFA10O95299 355 aa22.44■■□□□ 1.18
PNKP-203ENST00000593946 SERPING1P05155 500 aa22.44■■□□□ 1.18
PNKP-203ENST00000593946 HSPA8P11142 646 aaKnown RBP22.44■■□□□ 1.18
PNKP-203ENST00000593946 ASIC2Q16515 512 aa22.44■■□□□ 1.18
PNKP-203ENST00000593946 FAM26DQ5JW98 314 aa22.44■■□□□ 1.18
PNKP-203ENST00000593946 IRF2BP2Q7Z5L9 587 aa22.44■■□□□ 1.18
PNKP-203ENST00000593946 CTU1Q7Z7A3 348 aaKnown RBP22.44■■□□□ 1.18
PNKP-203ENST00000593946 CCDC94Q9BW85 323 aaPredicted RBP22.44■■□□□ 1.18
PNKP-203ENST00000593946 SEZ6LQ9BYH1 1024 aa22.44■■□□□ 1.18
PNKP-203ENST00000593946 TRMT1Q9NXH9 659 aaKnown RBP22.44■■□□□ 1.18
PNKP-203ENST00000593946 ADGRG1Q9Y653 693 aa22.44■■□□□ 1.18
PNKP-203ENST00000593946 SSU72P8A0A1W2PR75 194 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 CAND2O75155 1236 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 RPS6KA5O75582 802 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 SOX5P35711 763 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 STAT1P42224 750 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 MAPK8IP2Q13387 824 aaPredicted RBP22.43■■□□□ 1.18
PNKP-203ENST00000593946 UBXN11Q5T124 520 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 TRAPPC11Q7Z392 1133 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 GPIHBP1Q8IV16 184 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 HELQQ8TDG4 1101 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 PI4K2AQ9BTU6 479 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 TRPV6Q9H1D0 765 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 CCP110O43303 1012 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 TMEM191BP0C7N4 346 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 CYLC1P35663 651 aaPredicted RBP22.43■■□□□ 1.18
PNKP-203ENST00000593946 EIF4A3P38919 411 aaKnown RBP22.43■■□□□ 1.18
PNKP-203ENST00000593946 PRKCIP41743 596 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 TFAMQ00059 246 aaKnown RBP22.43■■□□□ 1.18
PNKP-203ENST00000593946 PPM1KQ8N3J5 372 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 PPP1R13BQ96KQ4 1090 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 KREMEN1Q96MU8 473 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 TRIM6Q9C030 488 aaPredicted RBP22.43■■□□□ 1.18
PNKP-203ENST00000593946 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.43■■□□□ 1.182e-7■■■■■ 93.2
PNKP-203ENST00000593946 ST3GAL5Q9UNP4 418 aa22.43■■□□□ 1.18
PNKP-203ENST00000593946 ZSCAN12O43309 604 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 PHACTR2O75167 634 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 NFICP08651 508 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 CCDC175P0C221 793 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 PNMA6AP0CW24 399 aaPredicted RBP22.42■■□□□ 1.18
PNKP-203ENST00000593946 GCNT1Q02742 428 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 ARID5AQ03989 594 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 NCOA4Q13772 614 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 ARHGAP44Q17R89 818 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 TDRD12Q587J7 1177 aaKnown RBP22.42■■□□□ 1.18
PNKP-203ENST00000593946 JADE1Q6IE81 842 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 FMNL3Q8IVF7 1028 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 CD302Q8IX05 232 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 KAT5Q92993 513 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 TATDN2Q93075 761 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 ANKRD36BP1Q96IX9 119 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 CCDC42Q96M95 316 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 NXF3Q9H4D5 531 aaKnown RBP22.42■■□□□ 1.18
PNKP-203ENST00000593946 PLEKHA5Q9HAU0 1116 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 C1orf112Q9NSG2 853 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 SNTG2Q9NY99 539 aa22.42■■□□□ 1.18
PNKP-203ENST00000593946 TNNC2P02585 160 aa22.41■■□□□ 1.18
PNKP-203ENST00000593946 FERP16591 822 aa22.41■■□□□ 1.18
PNKP-203ENST00000593946 CDK7P50613 346 aa22.41■■□□□ 1.18
PNKP-203ENST00000593946 MFAP3P55082 362 aa22.41■■□□□ 1.18
PNKP-203ENST00000593946 KLHL30Q0D2K2 578 aa22.41■■□□□ 1.18
PNKP-203ENST00000593946 ASTE1Q2TB18 679 aaPredicted RBP22.41■■□□□ 1.18
PNKP-203ENST00000593946 WDR44Q5JSH3 913 aa22.41■■□□□ 1.18
PNKP-203ENST00000593946 FBXO47Q5MNV8 452 aa22.41■■□□□ 1.18
PNKP-203ENST00000593946 FBXO46Q6PJ61 603 aaPredicted RBP22.41■■□□□ 1.18
PNKP-203ENST00000593946 REXO1L1PQ8IX06 675 aa22.41■■□□□ 1.18
PNKP-203ENST00000593946 ACRBPQ8NEB7 543 aa22.41■■□□□ 1.18
PNKP-203ENST00000593946 AGO3Q9H9G7 860 aaKnown RBP22.41■■□□□ 1.18
PNKP-203ENST00000593946 C2CD2Q9Y426 696 aa22.41■■□□□ 1.18
PNKP-203ENST00000593946 BZW2Q9Y6E2 419 aaKnown RBP22.41■■□□□ 1.18
PNKP-203ENST00000593946 EIF3CLB5ME19 914 aaKnown RBP22.4■■□□□ 1.18
PNKP-203ENST00000593946 RBAK-RBAKDNI3L0D1 243 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 FOXN3O00409 490 aaPredicted RBP22.4■■□□□ 1.18
PNKP-203ENST00000593946 EVI5O60447 810 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 GFPT2O94808 682 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 ZNF618Q5T7W0 954 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 NT5DC4Q86YG4 428 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 SHC3Q92529 594 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 ELMO3Q96BJ8 720 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 ZNF333Q96JL9 665 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 SNX27Q96L92 541 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 FAM81BQ96LP2 452 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 EIF3CQ99613 913 aaKnown RBP22.4■■□□□ 1.18
PNKP-203ENST00000593946 OSBPL7Q9BZF2 842 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 CHST12Q9NRB3 414 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 REXO2Q9Y3B8 237 aaKnown RBP22.4■■□□□ 1.18
PNKP-203ENST00000593946 HES2Q9Y543 173 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 GPR182O15218 404 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 CST3P01034 146 aaPredicted RBP22.4■■□□□ 1.18
PNKP-203ENST00000593946 CKBP12277 381 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 KIF11P52732 1056 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 TMEM132DQ14C87 1099 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 SCARA3Q6AZY7 606 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 TWF2Q6IBS0 349 aaKnown RBP22.4■■□□□ 1.18
PNKP-203ENST00000593946 ENOSF1Q7L5Y1 443 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 HAUS4Q9H6D7 363 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 ERVK-5Q9HDB9 667 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 SQORQ9Y6N5 450 aa22.4■■□□□ 1.18
PNKP-203ENST00000593946 RECQL4O94761 1208 aa22.39■■□□□ 1.17
PNKP-203ENST00000593946 LCA5LO95447 670 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms