RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 TCF15Q12870 199 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 ASTLQ6HA08 431 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-241ENST00000593048 FLCNQ8NFG4 579 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 RASSF8Q8NHQ8 419 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 SPIRE2Q8WWL2 714 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 CALML4Q96GE6 196 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 DDX27Q96GQ7 796 aaKnown RBP17.68■□□□□ 0.42
CIRBP-241ENST00000593048 AK8Q96MA6 479 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 MYADMQ96S97 322 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 NTPCRQ9BSD7 190 aaKnown RBP17.68■□□□□ 0.42
CIRBP-241ENST00000593048 KCND2Q9NZV8 630 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 EPS15L1Q9UBC2 864 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 POLIQ9UNA4 740 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 DUSP12Q9UNI6 340 aa17.68■□□□□ 0.42
CIRBP-241ENST00000593048 PLXNA3P51805 1871 aa17.67■□□□□ 0.42
CIRBP-241ENST00000593048 C8AP07357 584 aa17.67■□□□□ 0.42
CIRBP-241ENST00000593048 FGFR3P22607 806 aa17.67■□□□□ 0.42
CIRBP-241ENST00000593048 UBA7P41226 1012 aa17.67■□□□□ 0.42
CIRBP-241ENST00000593048 SLC12A3P55017 1021 aa17.67■□□□□ 0.42
CIRBP-241ENST00000593048 ALKAL1Q6UXT8 129 aa17.67■□□□□ 0.42
CIRBP-241ENST00000593048 GRASPQ7Z6J2 395 aaPredicted RBP17.67■□□□□ 0.42
CIRBP-241ENST00000593048 RSAD2Q8WXG1 361 aa17.67■□□□□ 0.42
CIRBP-241ENST00000593048 ATOH1Q92858 354 aaPredicted RBP17.67■□□□□ 0.42
CIRBP-241ENST00000593048 NXPE3Q969Y0 559 aa17.67■□□□□ 0.42
CIRBP-241ENST00000593048 BICD1Q96G01 975 aa17.67■□□□□ 0.42
CIRBP-241ENST00000593048 LARSQ9P2J5 1176 aaKnown RBP17.67■□□□□ 0.42
CIRBP-241ENST00000593048 ANKFY1Q9P2R3 1169 aa17.67■□□□□ 0.42
CIRBP-241ENST00000593048 CIZ1Q9ULV3 898 aaPredicted RBP17.67■□□□□ 0.42
CIRBP-241ENST00000593048 NPHP3-ACAD11A0A0J9YXS1 232 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 H0YCG3 227 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 I3L4J1 428 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 STK25O00506 426 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 PODXLO00592 558 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 CCL16O15467 120 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 ADAM12O43184 909 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 XYLBO75191 536 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 TOM1L1O75674 476 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 PAPLNO95428 1278 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 HNRNPA1P09651 372 aaKnown RBP eCLIP17.66■□□□□ 0.42
CIRBP-241ENST00000593048 PROZP22891 400 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 FSHRP23945 695 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 IGFBP6P24592 240 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-241ENST00000593048 TKTP29401 623 aaKnown RBP17.66■□□□□ 0.42
CIRBP-241ENST00000593048 BRCC3P46736 316 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 CACNB1Q02641 598 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-241ENST00000593048 RAB33AQ14088 237 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 DHX8Q14562 1220 aaKnown RBP17.66■□□□□ 0.42
CIRBP-241ENST00000593048 XKR4Q5GH76 650 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 ANKS3Q6ZW76 656 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 TMEM161BQ8NDZ6 487 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 ZBTB45Q96K62 511 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-241ENST00000593048 SNX27Q96L92 541 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 MTRRQ9UBK8 725 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 NUB1Q9Y5A7 615 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 CDY1Q9Y6F8 540 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 MYO10Q9HD67 2058 aa17.66■□□□□ 0.42
CIRBP-241ENST00000593048 DENND4AQ7Z401 1863 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 CLDN3O15551 220 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 SLC26A4O43511 780 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 GALR2O43603 387 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-241ENST00000593048 NARSO43776 548 aaKnown RBP17.65■□□□□ 0.42
CIRBP-241ENST00000593048 BMP15O95972 392 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 CFHP08603 1231 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 MAPTP10636 758 aaKnown RBP17.65■□□□□ 0.42
CIRBP-241ENST00000593048 LAMP2P13473 410 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 KCNE1P15382 129 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 RFX1P22670 979 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 CLCN5P51795 746 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 SOX4Q06945 474 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-241ENST00000593048 NOLC1Q14978 699 aaKnown RBP eCLIP17.65■□□□□ 0.42
CIRBP-241ENST00000593048 UVSSAQ2YD98 709 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 TMEM119Q4V9L6 283 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 AXDND1Q5T1B0 1012 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-241ENST00000593048 BRAPQ7Z569 592 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 SIX5Q8N196 739 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 TMEM105Q8N8V8 129 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 C3orf58Q8NDZ4 430 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 SLC7A14Q8TBB6 771 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 CNTN3Q9P232 1028 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 C2orf16Q68DN1 1984 aa17.65■□□□□ 0.42
CIRBP-241ENST00000593048 VPS37CA5D8V6 355 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-241ENST00000593048 H0Y858 1186 aa17.64■□□□□ 0.41
CIRBP-241ENST00000593048 KRT18P05783 430 aaKnown RBP17.64■□□□□ 0.41
CIRBP-241ENST00000593048 HOXA9P31269 272 aa17.64■□□□□ 0.41
CIRBP-241ENST00000593048 RPL9P32969 192 aaKnown RBP17.64■□□□□ 0.41
CIRBP-241ENST00000593048 SEZ6Q53EL9 994 aa17.64■□□□□ 0.41
CIRBP-241ENST00000593048 CD300LGQ6UXG3 332 aa17.64■□□□□ 0.41
CIRBP-241ENST00000593048 GPBP1Q86WP2 473 aa17.64■□□□□ 0.41
CIRBP-241ENST00000593048 SLC44A3Q8N4M1 653 aa17.64■□□□□ 0.41
CIRBP-241ENST00000593048 ZMAT2Q96NC0 199 aaKnown RBP17.64■□□□□ 0.41
CIRBP-241ENST00000593048 FAM86C1Q9NVL1 165 aa17.64■□□□□ 0.41
CIRBP-241ENST00000593048 BACE2Q9Y5Z0 518 aa17.64■□□□□ 0.41
CIRBP-241ENST00000593048 ZFP37Q9Y6Q3 630 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-241ENST00000593048 ABLIM1O14639 778 aa17.63■□□□□ 0.41
CIRBP-241ENST00000593048 FAM13AO94988 1023 aa17.63■□□□□ 0.41
CIRBP-241ENST00000593048 ELF1P32519 619 aa17.63■□□□□ 0.41
CIRBP-241ENST00000593048 LONP1P36776 959 aaKnown RBP17.63■□□□□ 0.41
CIRBP-241ENST00000593048 ARPP19P56211 112 aa17.63■□□□□ 0.41
CIRBP-241ENST00000593048 NTHL1P78549 312 aa17.63■□□□□ 0.41
CIRBP-241ENST00000593048 ARSHQ5FYA8 562 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms