RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 NID2Q14112 1375 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 ARHGEF37A1IGU5 675 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 WDR27A2RRH5 827 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 ZBTB39O15060 712 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 AXIN1O15169 862 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 NPTXRO95502 500 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 CCNE1P24864 410 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 GDI1P31150 447 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 HOXA6P31267 233 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 RFC5P40937 340 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 RAP1GAPP47736 663 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 RING1Q06587 406 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 CAPSQ13938 189 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 ADCK5Q3MIX3 580 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 PSAPL1Q6NUJ1 521 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 TXNDC11Q6PKC3 985 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 ASAP3Q8TDY4 903 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 TBCKQ8TEA7 893 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 CEP170P1Q96L14 293 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 TRMT61BQ9BVS5 477 aaKnown RBP11.93□□□□□ -0.5
RANBP3-230ENST00000593025 CDY1Q9Y6F8 540 aa11.93□□□□□ -0.5
RANBP3-230ENST00000593025 TTLL13PA6NNM8 815 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 SOBPA7XYQ1 873 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 M0R2N6 131 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 PRPF3O43395 683 aaKnown RBP11.92□□□□□ -0.5
RANBP3-230ENST00000593025 SLC37A4O43826 429 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 GNA11P29992 359 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 VIPR2P41587 438 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 QARSP47897 775 aaKnown RBP11.92□□□□□ -0.5
RANBP3-230ENST00000593025 SOX9P48436 509 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 RCAN1P53805 252 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 AAMPQ13685 434 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 PCBP1Q15365 356 aaKnown RBP eCLIP11.92□□□□□ -0.5
RANBP3-230ENST00000593025 TCEAL6Q6IPX3 200 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 LRSAM1Q6UWE0 723 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.92□□□□□ -0.5
RANBP3-230ENST00000593025 KBTBD6Q86V97 674 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 WDR5BQ86VZ2 330 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 IRF7Q92985 503 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 TCEAL3Q969E4 200 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 ZFP14Q9HCL3 533 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 VPS54Q9P1Q0 977 aa11.92□□□□□ -0.5
RANBP3-230ENST00000593025 MAST4O15021 2626 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 A0A1B0GUA9 196 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 INO80B-WBP1J3KQ70 363 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 PSMC3P17980 439 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 PPP2R5CQ13362 524 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 NPY5RQ15761 445 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 NTRK3Q16288 839 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 PKN3Q6P5Z2 889 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 SLC27A1Q6PCB7 646 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 RTL10Q7L3V2 364 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 DHX32Q7L7V1 743 aaKnown RBP11.91□□□□□ -0.5
RANBP3-230ENST00000593025 RASEFQ8IZ41 740 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 C3orf58Q8NDZ4 430 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 CCDC12Q8WUD4 166 aaPredicted RBP11.91□□□□□ -0.5
RANBP3-230ENST00000593025 SMARCD2Q92925 531 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 DDX27Q96GQ7 796 aaKnown RBP11.91□□□□□ -0.5
RANBP3-230ENST00000593025 ADAM33Q9BZ11 813 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 PARP2Q9UGN5 583 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 PPME1Q9Y570 386 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 BACE2Q9Y5Z0 518 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 BPTFQ12830 3046 aa11.91□□□□□ -0.5
RANBP3-230ENST00000593025 KIF26AQ9ULI4 1882 aaPredicted RBP11.91□□□□□ -0.5
RANBP3-230ENST00000593025 I3L4J1 428 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 ASAP2O43150 1006 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 EXTL3O43909 919 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 MICAL2O94851 1124 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 ABLIM3O94929 683 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 SEC24AO95486 1093 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 PTPN2P17706 415 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 TKTP29401 623 aaKnown RBP11.9□□□□□ -0.5
RANBP3-230ENST00000593025 YWHABP31946 246 aaKnown RBP11.9□□□□□ -0.5
RANBP3-230ENST00000593025 MLLT6P55198 1093 aaPredicted RBP11.9□□□□□ -0.5
RANBP3-230ENST00000593025 ROR1Q01973 937 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 FOXC1Q12948 553 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 CEP68Q76N32 757 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 C12orf50Q8NA57 414 aaPredicted RBP11.9□□□□□ -0.5
RANBP3-230ENST00000593025 BICD2Q8TD16 824 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 TCP11Q8WWU5 503 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 GAB3Q8WWW8 586 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 LOXL4Q96JB6 756 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 CORO1BQ9BR76 489 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 LXNQ9BS40 222 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 ESYT1Q9BSJ8 1104 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 TRIM6Q9C030 488 aaPredicted RBP11.9□□□□□ -0.5
RANBP3-230ENST00000593025 TRPV4Q9HBA0 871 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 LHX6Q9UPM6 363 aa11.9□□□□□ -0.5
RANBP3-230ENST00000593025 CELSR3Q9NYQ7 3312 aa11.89□□□□□ -0.51
RANBP3-230ENST00000593025 TRIP11Q15643 1979 aa11.89□□□□□ -0.51
RANBP3-230ENST00000593025 SLC38A8A6NNN8 435 aa11.89□□□□□ -0.51
RANBP3-230ENST00000593025 TMEM189-UBE2V1I3L0A0 370 aa11.89□□□□□ -0.51
RANBP3-230ENST00000593025 TAF4O00268 1085 aa11.89□□□□□ -0.51
RANBP3-230ENST00000593025 EDN1P05305 212 aa11.89□□□□□ -0.51
RANBP3-230ENST00000593025 CPA1P15085 419 aa11.89□□□□□ -0.51
RANBP3-230ENST00000593025 GJA1P17302 382 aa11.89□□□□□ -0.51
RANBP3-230ENST00000593025 GLRA2P23416 452 aa11.89□□□□□ -0.51
RANBP3-230ENST00000593025 ARL2P36404 184 aa11.89□□□□□ -0.51
RANBP3-230ENST00000593025 PXNP49023 591 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms