RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 ZPBP2Q6X784 338 aa25.49■■□□□ 1.67
MBD3-211ENST00000592965 PRSS33Q8NF86 280 aa25.49■■□□□ 1.67
MBD3-211ENST00000592965 KCNN1Q92952 543 aa25.49■■□□□ 1.67
MBD3-211ENST00000592965 ACAP3Q96P50 834 aa25.49■■□□□ 1.67
MBD3-211ENST00000592965 H0YCG3 227 aa25.48■■□□□ 1.67
MBD3-211ENST00000592965 PDGFBP01127 241 aaPredicted RBP25.48■■□□□ 1.67
MBD3-211ENST00000592965 SOX4Q06945 474 aaPredicted RBP25.48■■□□□ 1.67
MBD3-211ENST00000592965 NOLC1Q14978 699 aaKnown RBP eCLIP25.48■■□□□ 1.67
MBD3-211ENST00000592965 ARSHQ5FYA8 562 aa25.48■■□□□ 1.67
MBD3-211ENST00000592965 C3orf58Q8NDZ4 430 aa25.48■■□□□ 1.67
MBD3-211ENST00000592965 CALML4Q96GE6 196 aa25.48■■□□□ 1.67
MBD3-211ENST00000592965 DDX27Q96GQ7 796 aaKnown RBP25.48■■□□□ 1.67
MBD3-211ENST00000592965 ZMAT2Q96NC0 199 aaKnown RBP25.48■■□□□ 1.67
MBD3-211ENST00000592965 PIDD1Q9HB75 910 aa25.48■■□□□ 1.67
MBD3-211ENST00000592965 GOLGA2P5Q9HBQ8 144 aa25.48■■□□□ 1.67
MBD3-211ENST00000592965 CNTN3Q9P232 1028 aa25.48■■□□□ 1.67
MBD3-211ENST00000592965 IGSF9Q9P2J2 1179 aa25.48■■□□□ 1.67
MBD3-211ENST00000592965 LARSQ9P2J5 1176 aaKnown RBP25.48■■□□□ 1.67
MBD3-211ENST00000592965 EPS15L1Q9UBC2 864 aa25.48■■□□□ 1.67
MBD3-211ENST00000592965 MTRRQ9UBK8 725 aa25.48■■□□□ 1.67
MBD3-211ENST00000592965 ODF2LQ9ULJ1 636 aa25.48■■□□□ 1.67
MBD3-211ENST00000592965 ADAM12O43184 909 aa25.47■■□□□ 1.67
MBD3-211ENST00000592965 TRAPPC3O43617 180 aa25.47■■□□□ 1.67
MBD3-211ENST00000592965 PDCP20941 246 aa25.47■■□□□ 1.67
MBD3-211ENST00000592965 IGFBP6P24592 240 aaPredicted RBP25.47■■□□□ 1.67
MBD3-211ENST00000592965 AVPR2P30518 371 aa25.47■■□□□ 1.67
MBD3-211ENST00000592965 LONP1P36776 959 aaKnown RBP25.47■■□□□ 1.67
MBD3-211ENST00000592965 TDGQ13569 410 aa25.47■■□□□ 1.67
MBD3-211ENST00000592965 LIN9Q5TKA1 542 aa25.47■■□□□ 1.67
MBD3-211ENST00000592965 ZBTB45Q96K62 511 aaPredicted RBP25.47■■□□□ 1.67
MBD3-211ENST00000592965 KCNK12Q9HB15 430 aa25.47■■□□□ 1.67
MBD3-211ENST00000592965 ANKFY1Q9P2R3 1169 aa25.47■■□□□ 1.67
MBD3-211ENST00000592965 NPHP3-ACAD11A0A0J9YXS1 232 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 HNRNPA1P09651 372 aaKnown RBP eCLIP25.46■■□□□ 1.67
MBD3-211ENST00000592965 HARSP12081 509 aaKnown RBP25.46■■□□□ 1.67
MBD3-211ENST00000592965 SCP2P22307 547 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 HOXA9P31269 272 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 GBP2P32456 591 aaPredicted RBP25.46■■□□□ 1.67
MBD3-211ENST00000592965 PTPN5P54829 565 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 NCKAP1LP55160 1127 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 RAB33AQ14088 237 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 SF3A1Q15459 793 aaKnown RBP25.46■■□□□ 1.67
MBD3-211ENST00000592965 GPBP1Q86WP2 473 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 LRRC15Q8TF66 581 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 MYADMQ96S97 322 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 REEP2Q9BRK0 252 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 BLOC1S4Q9NUP1 217 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 DUSP12Q9UNI6 340 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 BACE2Q9Y5Z0 518 aa25.46■■□□□ 1.67
MBD3-211ENST00000592965 VPS37CA5D8V6 355 aaPredicted RBP25.45■■□□□ 1.66
MBD3-211ENST00000592965 MEFVO15553 781 aaPredicted RBP25.45■■□□□ 1.66
MBD3-211ENST00000592965 CACNB1Q02641 598 aaPredicted RBP25.45■■□□□ 1.66
MBD3-211ENST00000592965 GRIN1Q05586 938 aa25.45■■□□□ 1.66
MBD3-211ENST00000592965 MCL1Q07820 350 aa25.45■■□□□ 1.66
MBD3-211ENST00000592965 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.45■■□□□ 1.661e-11■■□□□ 12
MBD3-211ENST00000592965 PODXLO00592 558 aa25.44■■□□□ 1.66
MBD3-211ENST00000592965 C8AP07357 584 aa25.44■■□□□ 1.66
MBD3-211ENST00000592965 POU2F2P09086 479 aa25.44■■□□□ 1.66
MBD3-211ENST00000592965 PLCG1P19174 1290 aa25.44■■□□□ 1.66
MBD3-211ENST00000592965 TKTP29401 623 aaKnown RBP25.44■■□□□ 1.66
MBD3-211ENST00000592965 RPL9P32969 192 aaKnown RBP25.44■■□□□ 1.66
MBD3-211ENST00000592965 OR1D2P34982 312 aa25.44■■□□□ 1.66
MBD3-211ENST00000592965 ZNF131P52739 623 aa25.44■■□□□ 1.66
MBD3-211ENST00000592965 NUBP1P53384 320 aa25.44■■□□□ 1.66
MBD3-211ENST00000592965 ANKS3Q6ZW76 656 aa25.44■■□□□ 1.66
MBD3-211ENST00000592965 I3L4J1 428 aa25.43■■□□□ 1.66
MBD3-211ENST00000592965 CLDN3O15551 220 aa25.43■■□□□ 1.66
MBD3-211ENST00000592965 BRCC3P46736 316 aa25.43■■□□□ 1.66
MBD3-211ENST00000592965 KARSQ15046 597 aaKnown RBP25.43■■□□□ 1.66
MBD3-211ENST00000592965 SLC10A6Q3KNW5 377 aa25.43■■□□□ 1.66
MBD3-211ENST00000592965 PPM1LQ5SGD2 360 aa25.43■■□□□ 1.66
MBD3-211ENST00000592965 RTL10Q7L3V2 364 aa25.43■■□□□ 1.66
MBD3-211ENST00000592965 HAUS6Q7Z4H7 955 aa25.43■■□□□ 1.66
MBD3-211ENST00000592965 RAD54LQ92698 747 aa25.43■■□□□ 1.66
MBD3-211ENST00000592965 NXPE3Q969Y0 559 aa25.43■■□□□ 1.66
MBD3-211ENST00000592965 C18orf25Q96B23 403 aaPredicted RBP25.43■■□□□ 1.66
MBD3-211ENST00000592965 CDY1Q9Y6F8 540 aa25.43■■□□□ 1.66
MBD3-211ENST00000592965 TCF15Q12870 199 aa25.42■■□□□ 1.66
MBD3-211ENST00000592965 UVSSAQ2YD98 709 aa25.42■■□□□ 1.66
MBD3-211ENST00000592965 RSPO2Q6UXX9 243 aaPredicted RBP25.42■■□□□ 1.66
MBD3-211ENST00000592965 GET4Q7L5D6 327 aaPredicted RBP25.42■■□□□ 1.66
MBD3-211ENST00000592965 RASSF8Q8NHQ8 419 aa25.42■■□□□ 1.66
MBD3-211ENST00000592965 CCSER1Q9C0I3 900 aa25.42■■□□□ 1.66
MBD3-211ENST00000592965 PARVGQ9HBI0 331 aa25.42■■□□□ 1.66
MBD3-211ENST00000592965 NOTCH4Q99466 2003 aa25.42■■□□□ 1.66
MBD3-211ENST00000592965 SYN3O14994 580 aa25.41■■□□□ 1.66
MBD3-211ENST00000592965 XYLBO75191 536 aa25.41■■□□□ 1.66
MBD3-211ENST00000592965 FAM13AO94988 1023 aa25.41■■□□□ 1.66
MBD3-211ENST00000592965 LAMP2P13473 410 aa25.41■■□□□ 1.66
MBD3-211ENST00000592965 DHX8Q14562 1220 aaKnown RBP25.41■■□□□ 1.66
MBD3-211ENST00000592965 MCM6Q14566 821 aa25.41■■□□□ 1.66
MBD3-211ENST00000592965 AXDND1Q5T1B0 1012 aaPredicted RBP25.41■■□□□ 1.66
MBD3-211ENST00000592965 SLC7A14Q8TBB6 771 aa25.41■■□□□ 1.66
MBD3-211ENST00000592965 BICD1Q96G01 975 aa25.41■■□□□ 1.66
MBD3-211ENST00000592965 HAPLN2Q9GZV7 340 aa25.41■■□□□ 1.66
MBD3-211ENST00000592965 PLEKHA5Q9HAU0 1116 aa25.41■■□□□ 1.66
MBD3-211ENST00000592965 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.41■■□□□ 1.66
MBD3-211ENST00000592965 ZFP37Q9Y6Q3 630 aaPredicted RBP25.41■■□□□ 1.66
MBD3-211ENST00000592965 PIGRP01833 764 aa25.4■■□□□ 1.66
MBD3-211ENST00000592965 CLTAP09496 248 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms