RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 RBBP8NLQ8NC74 664 aaPredicted RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 DEPTORQ8TB45 409 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SLC35C1Q96A29 364 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ERP27Q96DN0 273 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 NSL1Q96IY1 281 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 VCPIP1Q96JH7 1222 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 TRAPPC9Q96Q05 1148 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 DDX23Q9BUQ8 820 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 PACSIN1Q9BY11 444 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 YIPF3Q9GZM5 350 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 CDC42EP4Q9H3Q1 356 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 TMEM59LQ9UK28 342 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 PCDHB2Q9Y5E7 798 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SNAP23O00161 211 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 BACH1O14867 736 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 FANCGO15287 622 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ONECUT3O60422 494 aaPredicted RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 FKBP6O75344 327 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 BAG2O95816 211 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ABL1P00519 1130 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 TFRCP02786 760 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 DLATP10515 647 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 CALB2P22676 271 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 HSPA1LP34931 641 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 QARSP47897 775 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 SERPINB9P50453 376 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 YWHAGP61981 247 aaKnown RBP eCLIP3.74□□□□□ -1.81
VMP1-216ENST00000592790 ENPEPQ07075 957 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 PIGHQ14442 188 aaPredicted RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 NPY5RQ15761 445 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ADRM1Q16186 407 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 CNGA2Q16280 664 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SLC15A2Q16348 729 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 HIF1AQ16665 826 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 KYNUQ16719 465 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 GSTA3Q16772 222 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 LONRF1Q17RB8 773 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SLC45A4Q5BKX6 768 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 POTEAQ6S8J7 498 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ANO5Q75V66 913 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 IRF2BP2Q7Z5L9 587 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ADGRA1Q86SQ6 560 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 CATSPER3Q86XQ3 398 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ZBTB8OSQ8IWT0 167 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 TMC2Q8TDI7 906 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 STK32AQ8WU08 396 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 ART4Q93070 314 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 CCDC127Q96BQ5 260 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 DNAJC19Q96DA6 116 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 DYDC2Q96IM9 177 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 NGLY1Q96IV0 654 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 TMEM237Q96Q45 408 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 EFHD1Q9BUP0 239 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 DRC3Q9H069 523 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 KLC2Q9H0B6 622 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 LRRC19Q9H756 370 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.74□□□□□ -1.81
VMP1-216ENST00000592790 IL17RBQ9NRM6 502 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 AGPAT3Q9NRZ7 376 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 MAP3K20Q9NYL2 800 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 WDR35Q9P2L0 1181 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SLC12A6Q9UHW9 1150 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 WDR64B1ANS9 1081 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 DDX3XO00571 662 aaKnown RBP eCLIP3.74□□□□□ -1.81
VMP1-216ENST00000592790 PPEF1O14829 653 aaPredicted RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 HGSO14964 777 aaPredicted RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 LPXNO60711 386 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SNUPNO95149 360 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 UNC5CO95185 931 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 KLHL2O95198 593 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 MYBP10242 640 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SLC16A2P36021 539 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 KPNA2P52292 529 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 ITGA8P53708 1063 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 POLE2P56282 527 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 GEMIN4P57678 1058 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 CTTNQ14247 550 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 ZNF268Q14587 947 aaPredicted RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 ZCWPW2Q504Y3 356 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 CEP55Q53EZ4 464 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 TEDDM1Q5T9Z0 273 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 XRRA1Q6P2D8 792 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 C6orf89Q6UWU4 347 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 FAM47EQ6ZV65 393 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 PIGWQ7Z7B1 504 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 LRRC57Q8N9N7 239 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 C12orf50Q8NA57 414 aaPredicted RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 SLC44A5Q8NCS7 719 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 FLAD1Q8NFF5 587 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 EXD1Q8NHP7 514 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 MDM1Q8TC05 714 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 SENP7Q9BQF6 1050 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 HAUS8Q9BT25 410 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 TSSK1BQ9BXA7 367 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 THAP2Q9H0W7 228 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 KCTD10Q9H3F6 313 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 RNPEPL1Q9HAU8 725 aa3.74□□□□□ -1.81
VMP1-216ENST00000592790 HERC5Q9UII4 1024 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 DBR1Q9UK59 544 aaKnown RBP3.74□□□□□ -1.81
VMP1-216ENST00000592790 FEM1BQ9UK73 627 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms