RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 URGCPQ8TCY9 931 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 OXER1Q8TDS5 423 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 RSPH1Q8WYR4 309 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 SLC39A7Q92504 469 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 NLRP4Q96MN2 994 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 MBOAT7Q96N66 472 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 FDXACB1Q9BRP7 624 aaPredicted RBP8.25□□□□□ -1.09
VAT1-209ENST00000592388 TMEM175Q9BSA9 504 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 CCDC86Q9H6F5 360 aaKnown RBP8.25□□□□□ -1.09
VAT1-209ENST00000592388 ZNF334Q9HCZ1 680 aaPredicted RBP8.25□□□□□ -1.09
VAT1-209ENST00000592388 PDRG1Q9NUG6 133 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 FAM105AQ9NUU6 356 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 WRAP73Q9P2S5 460 aaPredicted RBP8.25□□□□□ -1.09
VAT1-209ENST00000592388 VAV3Q9UKW4 847 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 SPTA1P02549 2419 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 PDCD11Q14690 1871 aaKnown RBP8.25□□□□□ -1.09
VAT1-209ENST00000592388 ASCC3Q8N3C0 2202 aaKnown RBP8.25□□□□□ -1.09
VAT1-209ENST00000592388 ZNF462Q96JM2 2506 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 URB1O60287 2271 aaKnown RBP8.24□□□□□ -1.09
VAT1-209ENST00000592388 PCNX2A6NKB5 2137 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 CITO14578 2027 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 CYP3A7-CYP3A51PA0A087WV96 503 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 CDX4O14627 284 aaPredicted RBP8.24□□□□□ -1.09
VAT1-209ENST00000592388 LARGE1O95461 756 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 CTDNEP1O95476 244 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 C8AP07357 584 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 CYP3A7P24462 503 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 GDI1P31150 447 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 NPEPPSP55786 919 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 LRRC32Q14392 662 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 PABPC1LQ4VXU2 614 aaKnown RBP8.24□□□□□ -1.09
VAT1-209ENST00000592388 LIN9Q5TKA1 542 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 ANO5Q75V66 913 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 POTEDQ86YR6 584 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 RHPN2Q8IUC4 686 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 ZNF579Q8NAF0 562 aaKnown RBP8.24□□□□□ -1.09
VAT1-209ENST00000592388 IRF7Q92985 503 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 ELSPBP1Q96BH3 223 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 ZNF274Q96GC6 653 aaPredicted RBP8.24□□□□□ -1.09
VAT1-209ENST00000592388 TRMT61BQ9BVS5 477 aaKnown RBP8.24□□□□□ -1.09
VAT1-209ENST00000592388 TM6SF1Q9BZW5 370 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 SLC32A1Q9H598 525 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 NRBP2Q9NSY0 501 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 FBXW11Q9UKB1 542 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 TPCN1Q9ULQ1 816 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 MRPS23Q9Y3D9 190 aaKnown RBP8.24□□□□□ -1.09
VAT1-209ENST00000592388 STK36Q9NRP7 1315 aa8.24□□□□□ -1.09
VAT1-209ENST00000592388 IGKV6-21A0A0C4DH24 114 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 CCDC194A0A1B0GVG4 234 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 FAM221BA6H8Z2 402 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 DDX11L8A8MPP1 907 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 J3QKU1 62 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 WNT7AO00755 349 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 NRG2O14511 850 aaPredicted RBP8.23□□□□□ -1.09
VAT1-209ENST00000592388 EXTL3O43909 919 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 XYLBO75191 536 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 C1RP00736 705 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 HNRNPA1P09651 372 aaKnown RBP eCLIP8.23□□□□□ -1.09
VAT1-209ENST00000592388 NR5A1Q13285 461 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 PPP2R5CQ13362 524 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 PLK5Q496M5 336 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 XKR3Q5GH77 459 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 WDR44Q5JSH3 913 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 MOXD1Q6UVY6 613 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 AGMOQ6ZNB7 445 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 PIK3AP1Q6ZUJ8 805 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 KRT25Q7Z3Z0 450 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 RNF168Q8IYW5 571 aaPredicted RBP8.23□□□□□ -1.09
VAT1-209ENST00000592388 NECAB1Q8N987 351 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 RDM1Q8NG50 284 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 PIK3R5Q8WYR1 880 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 HAS1Q92839 578 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 ZC3H10Q96K80 434 aaKnown RBP8.23□□□□□ -1.09
VAT1-209ENST00000592388 UBL7Q96S82 380 aaPredicted RBP8.23□□□□□ -1.09
VAT1-209ENST00000592388 NIFKQ9BYG3 293 aaKnown RBP8.23□□□□□ -1.09
VAT1-209ENST00000592388 C22orf23Q9BZE7 217 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 SLKQ9H2G2 1235 aaPredicted RBP8.23□□□□□ -1.09
VAT1-209ENST00000592388 KCNMB3Q9NPA1 279 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 CHST12Q9NRB3 414 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.23□□□□□ -1.09
VAT1-209ENST00000592388 CHST7Q9NS84 486 aa8.23□□□□□ -1.09
VAT1-209ENST00000592388 SUCLA2Q9P2R7 463 aaPredicted RBP8.23□□□□□ -1.09
VAT1-209ENST00000592388 DNMT3BQ9UBC3 853 aaKnown RBP8.23□□□□□ -1.09
VAT1-209ENST00000592388 PIN4Q9Y237 131 aaKnown RBP8.23□□□□□ -1.09
VAT1-209ENST00000592388 SHROOM3Q8TF72 1996 aa8.22□□□□□ -1.09
VAT1-209ENST00000592388 ANK1P16157 1881 aa8.22□□□□□ -1.09
VAT1-209ENST00000592388 PATE3B3GLJ2 98 aa8.22□□□□□ -1.09
VAT1-209ENST00000592388 H0Y626 953 aa8.22□□□□□ -1.09
VAT1-209ENST00000592388 KHNYNO15037 678 aaKnown RBP8.22□□□□□ -1.09
VAT1-209ENST00000592388 ZBTB39O15060 712 aa8.22□□□□□ -1.09
VAT1-209ENST00000592388 DCLK1O15075 740 aa8.22□□□□□ -1.09
VAT1-209ENST00000592388 EPB41L2O43491 1005 aaKnown RBP8.22□□□□□ -1.09
VAT1-209ENST00000592388 CCNT1O60563 726 aaKnown RBP8.22□□□□□ -1.09
VAT1-209ENST00000592388 ZNF623O75123 536 aa8.22□□□□□ -1.09
VAT1-209ENST00000592388 TRIM16O95361 564 aa8.22□□□□□ -1.09
VAT1-209ENST00000592388 EFEMP2O95967 443 aa8.22□□□□□ -1.09
VAT1-209ENST00000592388 SKIP12755 728 aa8.22□□□□□ -1.09
VAT1-209ENST00000592388 FCARP24071 287 aa8.22□□□□□ -1.09
VAT1-209ENST00000592388 HOXA6P31267 233 aa8.22□□□□□ -1.09
VAT1-209ENST00000592388 RDXP35241 583 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms