RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 CERKLQ49MI3 558 aaPredicted RBP12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 CCDC174Q6PII3 467 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 B3GNT6Q6ZMB0 384 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 SKA1Q96BD8 255 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 NSMCE3Q96MG7 304 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 HOXC10Q9NYD6 342 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 TAF1P21675 1872 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 KCNK3O14649 394 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 MAP3K7O43318 606 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 DGKIO75912 1065 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 TUBA1BP68363 451 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 COASYQ13057 564 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 CNGA3Q16281 694 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 LRRC55Q6ZSA7 311 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 TUBA1AQ71U36 451 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 ZBED8Q8IZ13 594 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 TTC30BQ8N4P2 665 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 PARVBQ9HBI1 364 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 CEP72Q9P209 647 aa12.99□□□□□ -0.33
SMARCA4-217ENST00000591595 ADAM23O75077 832 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 GJB6O95452 261 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 CYTH1Q15438 398 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 ADRM1Q16186 407 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 WDR72Q3MJ13 1102 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 Q6ZNX1 250 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 CLEC10AQ8IUN9 316 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 NEDD1Q8NHV4 660 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 STARD8Q92502 1023 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 FGFR1OP2Q9NVK5 253 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 PCDHA12Q9UN75 941 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 TTLL13PA6NNM8 815 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 TBKBP1A7MCY6 615 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 TTC34A8MYJ7 566 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 OR6B1O95007 311 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 MMP13P45452 471 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 NAA20P61599 178 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 TNNC1P63316 161 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 KCNMA1Q12791 1236 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 ASIC2Q16515 512 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 NUP93Q8N1F7 819 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 ZNF280CQ8ND82 737 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 GOLPH3Q9H4A6 298 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 SELENONQ9NZV5 590 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 A0A087X0T9 212 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 RASA4BC9J798 803 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 RASA4O43374 803 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 FAM228BP0C875 321 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 ITGA9Q13797 1035 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 NFIXQ14938 502 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 SLC10A5Q5PT55 438 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 SATL1Q86VE3 508 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 FAM186BQ8IYM0 893 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 CFAP61Q8NHU2 1237 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 TMEM237Q96Q45 408 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 PACSIN1Q9BY11 444 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 CLK4Q9HAZ1 481 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 RNF14Q9UBS8 474 aa12.98□□□□□ -0.33
SMARCA4-217ENST00000591595 E9PBE3 544 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 GOLGA8TH3BQL2 631 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 PJA2O43164 708 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 ZBTB17Q13105 803 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 EIF2B5Q13144 721 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 RPS6KA1Q15418 735 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 HGSNATQ68CP4 663 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 BBS5Q8N3I7 341 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 GABPB2Q8TAK5 448 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 DGCR14Q96DF8 476 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 MTMR9Q96QG7 549 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 FHDC1Q9C0D6 1143 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 ISCUQ9H1K1 167 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 KIAA1024Q9UPX6 916 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 FAM170AA1A519 330 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 E9PMD0 336 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 OPHN1O60890 802 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.338e-7■■■■□ 20
SMARCA4-217ENST00000591595 KCTD21Q4G0X4 260 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 KHDC1Q4VXA5 237 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 ESX1Q8N693 406 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 TBC1D16Q8TBP0 767 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 HGH1Q9BTY7 390 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 NDUFA13Q9P0J0 144 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 TTC7AQ9ULT0 858 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 DOLKQ9UPQ8 538 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 TNFRSF10AO00220 468 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 APOEP02649 317 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 IL4RP24394 825 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 EPHB2P29323 1055 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 VPS41P49754 854 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 NT5C2P49902 561 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 NEK3P51956 506 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 COG7P83436 770 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 AP1B1Q10567 949 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 GIT2Q14161 759 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 KCTD19Q17RG1 926 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 GPBP1Q86WP2 473 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 DNAAF5Q86Y56 855 aa12.97□□□□□ -0.33
SMARCA4-217ENST00000591595 PROM2Q8N271 834 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms