RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 SEZ6Q53EL9 994 aa19.76■□□□□ 0.75
H3F3B-209ENST00000589949 SIX5Q8N196 739 aa19.76■□□□□ 0.75
H3F3B-209ENST00000589949 SYT2Q8N9I0 419 aaPredicted RBP19.76■□□□□ 0.75
H3F3B-209ENST00000589949 FLCNQ8NFG4 579 aa19.76■□□□□ 0.75
H3F3B-209ENST00000589949 STAMQ92783 540 aa19.76■□□□□ 0.75
H3F3B-209ENST00000589949 DRC1Q96MC2 740 aa19.76■□□□□ 0.75
H3F3B-209ENST00000589949 RPP25Q9BUL9 199 aaKnown RBP19.76■□□□□ 0.75
H3F3B-209ENST00000589949 MTRRQ9UBK8 725 aa19.76■□□□□ 0.75
H3F3B-209ENST00000589949 VPS13AQ96RL7 3174 aa19.76■□□□□ 0.75
H3F3B-209ENST00000589949 ANHXE9PGG2 379 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 CCL16O15467 120 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 C8AP07357 584 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 CFHP08603 1231 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 CLCN5P51795 746 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 ELAVL2Q12926 359 aaKnown RBP19.75■□□□□ 0.75
H3F3B-209ENST00000589949 HTR4Q13639 388 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 RAB33AQ14088 237 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 TMEM119Q4V9L6 283 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 ARSHQ5FYA8 562 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 TMEM161BQ8NDZ6 487 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 C18orf25Q96B23 403 aaPredicted RBP19.75■□□□□ 0.75
H3F3B-209ENST00000589949 DDX27Q96GQ7 796 aaKnown RBP19.75■□□□□ 0.75
H3F3B-209ENST00000589949 SNX27Q96L92 541 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 HAPLN2Q9GZV7 340 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 MFSD1Q9H3U5 465 aa19.75■□□□□ 0.75
H3F3B-209ENST00000589949 RBM19Q9Y4C8 960 aaKnown RBP19.75■□□□□ 0.75
H3F3B-209ENST00000589949 MCF2P10911 925 aa19.74■□□□□ 0.75
H3F3B-209ENST00000589949 HARSP12081 509 aaKnown RBP19.74■□□□□ 0.75
H3F3B-209ENST00000589949 CACNB1Q02641 598 aaPredicted RBP19.74■□□□□ 0.75
H3F3B-209ENST00000589949 MPZL3Q6UWV2 235 aa19.74■□□□□ 0.75
H3F3B-209ENST00000589949 SLC7A14Q8TBB6 771 aa19.74■□□□□ 0.75
H3F3B-209ENST00000589949 SPIRE2Q8WWL2 714 aa19.74■□□□□ 0.75
H3F3B-209ENST00000589949 ATOH1Q92858 354 aaPredicted RBP19.74■□□□□ 0.75
H3F3B-209ENST00000589949 CCDC94Q9BW85 323 aaPredicted RBP19.74■□□□□ 0.75
H3F3B-209ENST00000589949 C17orf75Q9HAS0 396 aa19.74■□□□□ 0.75
H3F3B-209ENST00000589949 HCFC1R1Q9NWW0 138 aa19.74■□□□□ 0.75
H3F3B-209ENST00000589949 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.74■□□□□ 0.75
H3F3B-209ENST00000589949 KIF3AQ9Y496 699 aa19.74■□□□□ 0.75
H3F3B-209ENST00000589949 CDY1Q9Y6F8 540 aa19.74■□□□□ 0.75
H3F3B-209ENST00000589949 NOTCH4Q99466 2003 aa19.74■□□□□ 0.75
H3F3B-209ENST00000589949 HNRNPA1P09651 372 aaKnown RBP eCLIP19.73■□□□□ 0.75
H3F3B-209ENST00000589949 PLA2G4BP0C869 781 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 MAPTP10636 758 aaKnown RBP19.73■□□□□ 0.75
H3F3B-209ENST00000589949 PLS3P13797 630 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 KCNE1P15382 129 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 FSHRP23945 695 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 NUBP1P53384 320 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 GRIN1Q05586 938 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 SLC10A6Q3KNW5 377 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 PPM1LQ5SGD2 360 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 AXDND1Q5T1B0 1012 aaPredicted RBP19.73■□□□□ 0.75
H3F3B-209ENST00000589949 POTEHQ6S545 545 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 ITFG1Q8TB96 612 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 UROC1Q96N76 676 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 CNTN3Q9P232 1028 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 FBXL21Q9UKT6 434 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 NUMBLQ9Y6R0 609 aa19.73■□□□□ 0.75
H3F3B-209ENST00000589949 ZFHX2Q9C0A1 2572 aaPredicted RBP19.73■□□□□ 0.75
H3F3B-209ENST00000589949 H3BQV1 296 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 PODXLO00592 558 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 AOC1P19801 751 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 YARSP54577 528 aaKnown RBP19.72■□□□□ 0.75
H3F3B-209ENST00000589949 LIN9Q5TKA1 542 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 PDXDC1Q6P996 788 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 PARM1Q6UWI2 310 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 APBB1IPQ7Z5R6 666 aaPredicted RBP19.72■□□□□ 0.75
H3F3B-209ENST00000589949 FGF14Q92915 247 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 TBC1D32Q96NH3 1257 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 ACAP3Q96P50 834 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 TCHPQ9BT92 498 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 TIPINQ9BVW5 301 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 TOPORSQ9NS56 1045 aaPredicted RBP19.72■□□□□ 0.75
H3F3B-209ENST00000589949 DNMT3BQ9UBC3 853 aaKnown RBP19.72■□□□□ 0.75
H3F3B-209ENST00000589949 WNT16Q9UBV4 365 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 BACE2Q9Y5Z0 518 aa19.72■□□□□ 0.75
H3F3B-209ENST00000589949 CFAP54Q96N23 3096 aa19.71■□□□□ 0.75
H3F3B-209ENST00000589949 TBC1D4O60343 1298 aa19.71■□□□□ 0.75
H3F3B-209ENST00000589949 TOM1L1O75674 476 aa19.71■□□□□ 0.75
H3F3B-209ENST00000589949 SRFP11831 508 aa19.71■□□□□ 0.75
H3F3B-209ENST00000589949 HOXA9P31269 272 aa19.71■□□□□ 0.75
H3F3B-209ENST00000589949 ARL6IP4Q66PJ3 421 aaKnown RBP19.71■□□□□ 0.75
H3F3B-209ENST00000589949 GPR152Q8TDT2 470 aa19.71■□□□□ 0.75
H3F3B-209ENST00000589949 FGF13Q92913 245 aa19.71■□□□□ 0.75
H3F3B-209ENST00000589949 ANKFY1Q9P2R3 1169 aa19.71■□□□□ 0.75
H3F3B-209ENST00000589949 CDH7Q9ULB5 785 aa19.71■□□□□ 0.75
H3F3B-209ENST00000589949 CA14Q9ULX7 337 aa19.71■□□□□ 0.75
H3F3B-209ENST00000589949 POLIQ9UNA4 740 aa19.71■□□□□ 0.75
H3F3B-209ENST00000589949 MYO15AQ9UKN7 3530 aa19.71■□□□□ 0.75
H3F3B-209ENST00000589949 VARS2Q5ST30 1063 aaKnown RBP19.7■□□□□ 0.74
H3F3B-209ENST00000589949 ANKS3Q6ZW76 656 aa19.7■□□□□ 0.74
H3F3B-209ENST00000589949 NXPE3Q969Y0 559 aa19.7■□□□□ 0.74
H3F3B-209ENST00000589949 BLOC1S4Q9NUP1 217 aa19.7■□□□□ 0.74
H3F3B-209ENST00000589949 SLC38A7Q9NVC3 462 aa19.7■□□□□ 0.74
H3F3B-209ENST00000589949 DAXXQ9UER7 740 aaPredicted RBP19.7■□□□□ 0.74
H3F3B-209ENST00000589949 TUBGCP4Q9UGJ1 667 aa19.7■□□□□ 0.74
H3F3B-209ENST00000589949 SMC3Q9UQE7 1217 aa19.7■□□□□ 0.74
H3F3B-209ENST00000589949 COL4A3Q01955 1670 aa19.7■□□□□ 0.74
H3F3B-209ENST00000589949 NRG2O14511 850 aaPredicted RBP19.69■□□□□ 0.74
H3F3B-209ENST00000589949 NCKAP1LP55160 1127 aa19.69■□□□□ 0.74
H3F3B-209ENST00000589949 ROR1Q01973 937 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms